Gene : Sobic.008G089500 S. bicolor v3.1.1
Defline:  (1 of 1) 2.5.1.72 - Quinolinate synthase / Quinolinate synthetase Genomic Order:  946
Name:  ? Sobic.008G089500 Secondary Identifier:  ? PAC:37926490
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PYRIDNUCSYN-PWY Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G089500 0.5kb upstream 0.5kb upstream 23859   true Chr08: 32492621-32516479 Sorghum bicolor
Sobic.008G089500 0.5kb upstream 0.5kb upstream 500   false Chr08: 32515980-32516479 Sorghum bicolor
Sobic.008G089500 0.5kb downstream 0.5kb downstream 23859   true Chr08: 32492121-32515979 Sorghum bicolor
Sobic.008G089500 0.5kb downstream 0.5kb downstream 500   false Chr08: 32492121-32492620 Sorghum bicolor
Sobic.008G089500 1.0kb upstream 1.0kb upstream 24359   true Chr08: 32492621-32516979 Sorghum bicolor
Sobic.008G089500 1.0kb upstream 1.0kb upstream 1000   false Chr08: 32515980-32516979 Sorghum bicolor
Sobic.008G089500 1.0kb downstream 1.0kb downstream 24359   true Chr08: 32491621-32515979 Sorghum bicolor
Sobic.008G089500 1.0kb downstream 1.0kb downstream 1000   false Chr08: 32491621-32492620 Sorghum bicolor
Sobic.008G089500 2.0kb upstream 2.0kb upstream 25359   true Chr08: 32492621-32517979 Sorghum bicolor
Sobic.008G089500 2.0kb upstream 2.0kb upstream 2000   false Chr08: 32515980-32517979 Sorghum bicolor
Sobic.008G089500 2.0kb downstream 2.0kb downstream 25359   true Chr08: 32490621-32515979 Sorghum bicolor
Sobic.008G089500 2.0kb downstream 2.0kb downstream 2000   false Chr08: 32490621-32492620 Sorghum bicolor
Sobic.008G089500 5.0kb upstream 5.0kb upstream 28359   true Chr08: 32492621-32520979 Sorghum bicolor
Sobic.008G089500 5.0kb upstream 5.0kb upstream 5000   false Chr08: 32515980-32520979 Sorghum bicolor
Sobic.008G089500 5.0kb downstream 5.0kb downstream 28359   true Chr08: 32487621-32515979 Sorghum bicolor
Sobic.008G089500 5.0kb downstream 5.0kb downstream 5000   false Chr08: 32487621-32492620 Sorghum bicolor
Sobic.008G089500 10.0kb upstream 10.0kb upstream 33359   true Chr08: 32492621-32525979 Sorghum bicolor
Sobic.008G089500 10.0kb upstream 10.0kb upstream 10000   false Chr08: 32515980-32525979 Sorghum bicolor
Sobic.008G089500 10.0kb downstream 10.0kb downstream 33359   true Chr08: 32482621-32515979 Sorghum bicolor
Sobic.008G089500 10.0kb downstream 10.0kb downstream 10000   false Chr08: 32482621-32492620 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194133 5267 Panicoideae View MSA
124584011 5269 Grass View MSA
122044938 5273 Angiosperm View MSA
121346502 5274 Embryophyte View MSA
123424432 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.892        
cufflinks 1.95        
cufflinks 2.279        
cufflinks 2.339        
cufflinks 1.225       Low
cufflinks 1.525        
cufflinks 2.396        
cufflinks 3.271       High
cufflinks 1.722        
cufflinks 1.858        
cufflinks 2.089        
cufflinks 3.108       High
cufflinks 1.546        
cufflinks 2.195        
cufflinks 1.422        
cufflinks 2.458        
cufflinks 2.412        
cufflinks 2.774       High
cufflinks 1.702        
cufflinks 2.819       High
cufflinks 1.186       Low
cufflinks 1.607        
cufflinks 2.848       High
cufflinks 2.464        
cufflinks 2.588        
cufflinks 2.856       High
cufflinks 1.732        
cufflinks 0.556       Low
cufflinks 2.944       High
cufflinks 1.45        

0 Strain