Gene : Sobic.010G116500 S. bicolor v3.1.1
Defline:  (1 of 1) PF05421 - Protein of unknown function (DUF751) (DUF751) Genomic Order:  1218
Name:  ? Sobic.010G116500 Secondary Identifier:  ? PAC:37911464
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G116500 0.5kb upstream 0.5kb upstream 1097   true Chr10: 12676938-12678034 Sorghum bicolor
Sobic.010G116500 0.5kb upstream 0.5kb upstream 500   false Chr10: 12676938-12677437 Sorghum bicolor
Sobic.010G116500 0.5kb downstream 0.5kb downstream 1097   true Chr10: 12677438-12678534 Sorghum bicolor
Sobic.010G116500 0.5kb downstream 0.5kb downstream 500   false Chr10: 12678035-12678534 Sorghum bicolor
Sobic.010G116500 1.0kb upstream 1.0kb upstream 1597   true Chr10: 12676438-12678034 Sorghum bicolor
Sobic.010G116500 1.0kb upstream 1.0kb upstream 1000   false Chr10: 12676438-12677437 Sorghum bicolor
Sobic.010G116500 1.0kb downstream 1.0kb downstream 1597   true Chr10: 12677438-12679034 Sorghum bicolor
Sobic.010G116500 1.0kb downstream 1.0kb downstream 1000   false Chr10: 12678035-12679034 Sorghum bicolor
Sobic.010G116500 2.0kb upstream 2.0kb upstream 2597   true Chr10: 12675438-12678034 Sorghum bicolor
Sobic.010G116500 2.0kb upstream 2.0kb upstream 2000   false Chr10: 12675438-12677437 Sorghum bicolor
Sobic.010G116500 2.0kb downstream 2.0kb downstream 2597   true Chr10: 12677438-12680034 Sorghum bicolor
Sobic.010G116500 2.0kb downstream 2.0kb downstream 2000   false Chr10: 12678035-12680034 Sorghum bicolor
Sobic.010G116500 5.0kb upstream 5.0kb upstream 5597   true Chr10: 12672438-12678034 Sorghum bicolor
Sobic.010G116500 5.0kb upstream 5.0kb upstream 5000   false Chr10: 12672438-12677437 Sorghum bicolor
Sobic.010G116500 5.0kb downstream 5.0kb downstream 5597   true Chr10: 12677438-12683034 Sorghum bicolor
Sobic.010G116500 5.0kb downstream 5.0kb downstream 5000   false Chr10: 12678035-12683034 Sorghum bicolor
Sobic.010G116500 10.0kb upstream 10.0kb upstream 10597   true Chr10: 12667438-12678034 Sorghum bicolor
Sobic.010G116500 10.0kb upstream 10.0kb upstream 10000   false Chr10: 12667438-12677437 Sorghum bicolor
Sobic.010G116500 10.0kb downstream 10.0kb downstream 10597   true Chr10: 12677438-12688034 Sorghum bicolor
Sobic.010G116500 10.0kb downstream 10.0kb downstream 10000   false Chr10: 12678035-12688034 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175875 5267 Panicoideae View MSA
124571258 5269 Grass View MSA
122045561 5273 Angiosperm View MSA
121348073 5274 Embryophyte View MSA
123380720 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.511       Low
cufflinks 16.658     High  
cufflinks 14.799     High  
cufflinks 7.332        
cufflinks 2.922        
cufflinks 10.943        
cufflinks 47.038     High High
cufflinks 37.542     High High
cufflinks 2.783        
cufflinks 3.496        
cufflinks 0.285       Low
cufflinks 0.808        
cufflinks 1.227        
cufflinks 0.791        
cufflinks 4.588        
cufflinks 11.642     High  
cufflinks 38.524     High High
cufflinks 55.929     High High
cufflinks 9.405        
cufflinks 15.952     High  
cufflinks 2.449        
cufflinks 1.669        
cufflinks 0.981        
cufflinks 0.688        
cufflinks 5.507        
cufflinks 16.296     High  
cufflinks 0.028     Low Low
cufflinks 0.038     Low Low
cufflinks 65.266     High High
cufflinks 5.607        

0 Strain