Gene : Sobic.008G090900 S. bicolor v3.1.1
Defline:  (1 of 10) PF11891 - Domain of unknown function (DUF3411) (DUF3411) Genomic Order:  961
Name:  ? Sobic.008G090900 Secondary Identifier:  ? PAC:37927279
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G090900 0.5kb upstream 0.5kb upstream 15731   true Chr08: 35636949-35652679 Sorghum bicolor
Sobic.008G090900 0.5kb upstream 0.5kb upstream 500   false Chr08: 35652180-35652679 Sorghum bicolor
Sobic.008G090900 0.5kb downstream 0.5kb downstream 15731   true Chr08: 35636449-35652179 Sorghum bicolor
Sobic.008G090900 0.5kb downstream 0.5kb downstream 500   false Chr08: 35636449-35636948 Sorghum bicolor
Sobic.008G090900 1.0kb upstream 1.0kb upstream 16231   true Chr08: 35636949-35653179 Sorghum bicolor
Sobic.008G090900 1.0kb upstream 1.0kb upstream 1000   false Chr08: 35652180-35653179 Sorghum bicolor
Sobic.008G090900 1.0kb downstream 1.0kb downstream 16231   true Chr08: 35635949-35652179 Sorghum bicolor
Sobic.008G090900 1.0kb downstream 1.0kb downstream 1000   false Chr08: 35635949-35636948 Sorghum bicolor
Sobic.008G090900 2.0kb upstream 2.0kb upstream 17231   true Chr08: 35636949-35654179 Sorghum bicolor
Sobic.008G090900 2.0kb upstream 2.0kb upstream 2000   false Chr08: 35652180-35654179 Sorghum bicolor
Sobic.008G090900 2.0kb downstream 2.0kb downstream 17231   true Chr08: 35634949-35652179 Sorghum bicolor
Sobic.008G090900 2.0kb downstream 2.0kb downstream 2000   false Chr08: 35634949-35636948 Sorghum bicolor
Sobic.008G090900 5.0kb upstream 5.0kb upstream 20231   true Chr08: 35636949-35657179 Sorghum bicolor
Sobic.008G090900 5.0kb upstream 5.0kb upstream 5000   false Chr08: 35652180-35657179 Sorghum bicolor
Sobic.008G090900 5.0kb downstream 5.0kb downstream 20231   true Chr08: 35631949-35652179 Sorghum bicolor
Sobic.008G090900 5.0kb downstream 5.0kb downstream 5000   false Chr08: 35631949-35636948 Sorghum bicolor
Sobic.008G090900 10.0kb upstream 10.0kb upstream 25231   true Chr08: 35636949-35662179 Sorghum bicolor
Sobic.008G090900 10.0kb upstream 10.0kb upstream 10000   false Chr08: 35652180-35662179 Sorghum bicolor
Sobic.008G090900 10.0kb downstream 10.0kb downstream 25231   true Chr08: 35626949-35652179 Sorghum bicolor
Sobic.008G090900 10.0kb downstream 10.0kb downstream 10000   false Chr08: 35626949-35636948 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041223 5273 Angiosperm View MSA
122187575 5267 Panicoideae View MSA
124577775 5269 Grass View MSA
121346356 5274 Embryophyte View MSA
123428208 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.233        
cufflinks 6.109        
cufflinks 7.579        
cufflinks 6.535        
cufflinks 6.971        
cufflinks 5.868        
cufflinks 8.098        
cufflinks 9.568     High High
cufflinks 6.644        
cufflinks 5.987        
cufflinks 4.908       Low
cufflinks 4.801       Low
cufflinks 5.784        
cufflinks 5.755        
cufflinks 7.638        
cufflinks 7.041        
cufflinks 7.81        
cufflinks 9.744       High
cufflinks 5.873        
cufflinks 6.006        
cufflinks 7.403        
cufflinks 5.425        
cufflinks 5.573        
cufflinks 5.405        
cufflinks 4.471       Low
cufflinks 6.33     High  
cufflinks 6.161        
cufflinks 6.366        
cufflinks 20.987     High High
cufflinks 8.406        

0 Strain