Gene : Sobic.010G115200 S. bicolor v3.1.1
Defline:  (1 of 2) K11129 - H/ACA ribonucleoprotein complex subunit 2 (NHP2, NOLA2) Genomic Order:  1204
Name:  ? Sobic.010G115200 Secondary Identifier:  ? PAC:37908449
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G115200 0.5kb upstream 0.5kb upstream 3892   true Chr10: 12290143-12294034 Sorghum bicolor
Sobic.010G115200 0.5kb upstream 0.5kb upstream 500   false Chr10: 12290143-12290642 Sorghum bicolor
Sobic.010G115200 0.5kb downstream 0.5kb downstream 3892   true Chr10: 12290643-12294534 Sorghum bicolor
Sobic.010G115200 0.5kb downstream 0.5kb downstream 500   false Chr10: 12294035-12294534 Sorghum bicolor
Sobic.010G115200 1.0kb upstream 1.0kb upstream 4392   true Chr10: 12289643-12294034 Sorghum bicolor
Sobic.010G115200 1.0kb upstream 1.0kb upstream 1000   false Chr10: 12289643-12290642 Sorghum bicolor
Sobic.010G115200 1.0kb downstream 1.0kb downstream 4392   true Chr10: 12290643-12295034 Sorghum bicolor
Sobic.010G115200 1.0kb downstream 1.0kb downstream 1000   false Chr10: 12294035-12295034 Sorghum bicolor
Sobic.010G115200 2.0kb upstream 2.0kb upstream 5392   true Chr10: 12288643-12294034 Sorghum bicolor
Sobic.010G115200 2.0kb upstream 2.0kb upstream 2000   false Chr10: 12288643-12290642 Sorghum bicolor
Sobic.010G115200 2.0kb downstream 2.0kb downstream 5392   true Chr10: 12290643-12296034 Sorghum bicolor
Sobic.010G115200 2.0kb downstream 2.0kb downstream 2000   false Chr10: 12294035-12296034 Sorghum bicolor
Sobic.010G115200 5.0kb upstream 5.0kb upstream 8392   true Chr10: 12285643-12294034 Sorghum bicolor
Sobic.010G115200 5.0kb upstream 5.0kb upstream 5000   false Chr10: 12285643-12290642 Sorghum bicolor
Sobic.010G115200 5.0kb downstream 5.0kb downstream 8392   true Chr10: 12290643-12299034 Sorghum bicolor
Sobic.010G115200 5.0kb downstream 5.0kb downstream 5000   false Chr10: 12294035-12299034 Sorghum bicolor
Sobic.010G115200 10.0kb upstream 10.0kb upstream 13392   true Chr10: 12280643-12294034 Sorghum bicolor
Sobic.010G115200 10.0kb upstream 10.0kb upstream 10000   false Chr10: 12280643-12290642 Sorghum bicolor
Sobic.010G115200 10.0kb downstream 10.0kb downstream 13392   true Chr10: 12290643-12304034 Sorghum bicolor
Sobic.010G115200 10.0kb downstream 10.0kb downstream 10000   false Chr10: 12294035-12304034 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040888 5273 Angiosperm View MSA
122180582 5267 Panicoideae View MSA
124585008 5269 Grass View MSA
121345742 5274 Embryophyte View MSA
123425979 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.563     High High
cufflinks 0.061       Low
cufflinks 0.514       Low
cufflinks 1.752        
cufflinks 5.692        
cufflinks 1.36        
cufflinks 4.328        
cufflinks 0.302       Low
cufflinks 3.583        
cufflinks 3.495        
cufflinks 9.025        
cufflinks 5.413        
cufflinks 1.345        
cufflinks 7.127        
cufflinks 2.003        
cufflinks 0.428       Low
cufflinks 5.259        
cufflinks 5.115        
cufflinks 0.372       Low
cufflinks 2.826        
cufflinks 17.796     High High
cufflinks 11.779     High  
cufflinks 9.537        
cufflinks 10.676        
cufflinks 0.1       Low
cufflinks 0.039       Low
cufflinks 3.372        
cufflinks 20.323     High High
cufflinks 1.969        
cufflinks 3.313        

0 Strain