Gene : Sobic.010G113700 S. bicolor v3.1.1
Defline:  (1 of 23) 3.4.22.33 - Fruit bromelain Genomic Order:  1190
Name:  ? Sobic.010G113700 Secondary Identifier:  ? PAC:37910961
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G113700 0.5kb upstream 0.5kb upstream 1547   true Chr10: 11974737-11976283 Sorghum bicolor
Sobic.010G113700 0.5kb upstream 0.5kb upstream 500   false Chr10: 11974737-11975236 Sorghum bicolor
Sobic.010G113700 0.5kb downstream 0.5kb downstream 1547   true Chr10: 11975237-11976783 Sorghum bicolor
Sobic.010G113700 0.5kb downstream 0.5kb downstream 500   false Chr10: 11976284-11976783 Sorghum bicolor
Sobic.010G113700 1.0kb upstream 1.0kb upstream 2047   true Chr10: 11974237-11976283 Sorghum bicolor
Sobic.010G113700 1.0kb upstream 1.0kb upstream 1000   false Chr10: 11974237-11975236 Sorghum bicolor
Sobic.010G113700 1.0kb downstream 1.0kb downstream 2047   true Chr10: 11975237-11977283 Sorghum bicolor
Sobic.010G113700 1.0kb downstream 1.0kb downstream 1000   false Chr10: 11976284-11977283 Sorghum bicolor
Sobic.010G113700 2.0kb upstream 2.0kb upstream 3047   true Chr10: 11973237-11976283 Sorghum bicolor
Sobic.010G113700 2.0kb upstream 2.0kb upstream 2000   false Chr10: 11973237-11975236 Sorghum bicolor
Sobic.010G113700 2.0kb downstream 2.0kb downstream 3047   true Chr10: 11975237-11978283 Sorghum bicolor
Sobic.010G113700 2.0kb downstream 2.0kb downstream 2000   false Chr10: 11976284-11978283 Sorghum bicolor
Sobic.010G113700 5.0kb upstream 5.0kb upstream 6047   true Chr10: 11970237-11976283 Sorghum bicolor
Sobic.010G113700 5.0kb upstream 5.0kb upstream 5000   false Chr10: 11970237-11975236 Sorghum bicolor
Sobic.010G113700 5.0kb downstream 5.0kb downstream 6047   true Chr10: 11975237-11981283 Sorghum bicolor
Sobic.010G113700 5.0kb downstream 5.0kb downstream 5000   false Chr10: 11976284-11981283 Sorghum bicolor
Sobic.010G113700 10.0kb upstream 10.0kb upstream 11047   true Chr10: 11965237-11976283 Sorghum bicolor
Sobic.010G113700 10.0kb upstream 10.0kb upstream 10000   false Chr10: 11965237-11975236 Sorghum bicolor
Sobic.010G113700 10.0kb downstream 10.0kb downstream 11047   true Chr10: 11975237-11986283 Sorghum bicolor
Sobic.010G113700 10.0kb downstream 10.0kb downstream 10000   false Chr10: 11976284-11986283 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030352 5273 Angiosperm View MSA
122147310 5267 Panicoideae Singleton cluster - no MSA
124440014 5269 Grass Singleton cluster - no MSA
121351776 5274 Embryophyte View MSA
123382319 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.152        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.281        
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.718       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain