Gene : Sobic.010G106300 S. bicolor v3.1.1
Defline:  (1 of 3) K10808 - ribonucleoside-diphosphate reductase subunit M2 (RRM2) Genomic Order:  1113
Name:  ? Sobic.010G106300 Secondary Identifier:  ? PAC:37908970
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Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6545 Sorghum bicolor pathologic  
Sbicolor PWY-7184 Sorghum bicolor pathologic  
Sbicolor PWY-7210 Sorghum bicolor pathologic  
Sbicolor PWY-7211 Sorghum bicolor pathologic  
Sbicolor PWY-7226 Sorghum bicolor pathologic  
Sbicolor PWY-7227 Sorghum bicolor pathologic  
Sbicolor PWY-7228 Sorghum bicolor pathologic  
Sbicolor PWY-7229 Sorghum bicolor pathologic  
Sbicolor PWY-841 Sorghum bicolor pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G106300 0.5kb upstream 0.5kb upstream 2234   true Chr10: 10184934-10187167 Sorghum bicolor
Sobic.010G106300 0.5kb upstream 0.5kb upstream 500   false Chr10: 10186668-10187167 Sorghum bicolor
Sobic.010G106300 0.5kb downstream 0.5kb downstream 2234   true Chr10: 10184434-10186667 Sorghum bicolor
Sobic.010G106300 0.5kb downstream 0.5kb downstream 500   false Chr10: 10184434-10184933 Sorghum bicolor
Sobic.010G106300 1.0kb upstream 1.0kb upstream 2734   true Chr10: 10184934-10187667 Sorghum bicolor
Sobic.010G106300 1.0kb upstream 1.0kb upstream 1000   false Chr10: 10186668-10187667 Sorghum bicolor
Sobic.010G106300 1.0kb downstream 1.0kb downstream 2734   true Chr10: 10183934-10186667 Sorghum bicolor
Sobic.010G106300 1.0kb downstream 1.0kb downstream 1000   false Chr10: 10183934-10184933 Sorghum bicolor
Sobic.010G106300 2.0kb upstream 2.0kb upstream 3734   true Chr10: 10184934-10188667 Sorghum bicolor
Sobic.010G106300 2.0kb upstream 2.0kb upstream 2000   false Chr10: 10186668-10188667 Sorghum bicolor
Sobic.010G106300 2.0kb downstream 2.0kb downstream 3734   true Chr10: 10182934-10186667 Sorghum bicolor
Sobic.010G106300 2.0kb downstream 2.0kb downstream 2000   false Chr10: 10182934-10184933 Sorghum bicolor
Sobic.010G106300 5.0kb upstream 5.0kb upstream 6734   true Chr10: 10184934-10191667 Sorghum bicolor
Sobic.010G106300 5.0kb upstream 5.0kb upstream 5000   false Chr10: 10186668-10191667 Sorghum bicolor
Sobic.010G106300 5.0kb downstream 5.0kb downstream 6734   true Chr10: 10179934-10186667 Sorghum bicolor
Sobic.010G106300 5.0kb downstream 5.0kb downstream 5000   false Chr10: 10179934-10184933 Sorghum bicolor
Sobic.010G106300 10.0kb upstream 10.0kb upstream 11734   true Chr10: 10184934-10196667 Sorghum bicolor
Sobic.010G106300 10.0kb upstream 10.0kb upstream 10000   false Chr10: 10186668-10196667 Sorghum bicolor
Sobic.010G106300 10.0kb downstream 10.0kb downstream 11734   true Chr10: 10174934-10186667 Sorghum bicolor
Sobic.010G106300 10.0kb downstream 10.0kb downstream 10000   false Chr10: 10174934-10184933 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191412 5267 Panicoideae View MSA
124585111 5269 Grass View MSA
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.441     High High
cufflinks 0.966       Low
cufflinks 1.562       Low
cufflinks 2.636        
cufflinks 5.587        
cufflinks 5.657        
cufflinks 9.547       High
cufflinks 1.384       Low
cufflinks 9.681       High
cufflinks 5.644        
cufflinks 3.796        
cufflinks 5.987        
cufflinks 1.109       Low
cufflinks 4.012        
cufflinks 3.774        
cufflinks 1.805        
cufflinks 7.336        
cufflinks 7.228        
cufflinks 2.949        
cufflinks 5.22        
cufflinks 14.33     High High
cufflinks 6.612        
cufflinks 3.312        
cufflinks 4.151        
cufflinks 0.519       Low
cufflinks 0.523       Low
cufflinks 3.694        
cufflinks 2.013        
cufflinks 2.708        
cufflinks 7.542        

0 Strain