Gene : Sobic.008G178901 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR11527//PTHR11527:SF151 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // SUBFAMILY NOT NAMED Genomic Order:  1876
Name:  ? Sobic.008G178901 Secondary Identifier:  ? PAC:37926738
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G178901 0.5kb upstream 0.5kb upstream 2513   true Chr08: 61268280-61270792 Sorghum bicolor
Sobic.008G178901 0.5kb upstream 0.5kb upstream 500   false Chr08: 61270293-61270792 Sorghum bicolor
Sobic.008G178901 0.5kb downstream 0.5kb downstream 2513   true Chr08: 61267780-61270292 Sorghum bicolor
Sobic.008G178901 0.5kb downstream 0.5kb downstream 500   false Chr08: 61267780-61268279 Sorghum bicolor
Sobic.008G178901 1.0kb upstream 1.0kb upstream 3013   true Chr08: 61268280-61271292 Sorghum bicolor
Sobic.008G178901 1.0kb upstream 1.0kb upstream 1000   false Chr08: 61270293-61271292 Sorghum bicolor
Sobic.008G178901 1.0kb downstream 1.0kb downstream 3013   true Chr08: 61267280-61270292 Sorghum bicolor
Sobic.008G178901 1.0kb downstream 1.0kb downstream 1000   false Chr08: 61267280-61268279 Sorghum bicolor
Sobic.008G178901 2.0kb upstream 2.0kb upstream 4013   true Chr08: 61268280-61272292 Sorghum bicolor
Sobic.008G178901 2.0kb upstream 2.0kb upstream 2000   false Chr08: 61270293-61272292 Sorghum bicolor
Sobic.008G178901 2.0kb downstream 2.0kb downstream 4013   true Chr08: 61266280-61270292 Sorghum bicolor
Sobic.008G178901 2.0kb downstream 2.0kb downstream 2000   false Chr08: 61266280-61268279 Sorghum bicolor
Sobic.008G178901 5.0kb upstream 5.0kb upstream 7013   true Chr08: 61268280-61275292 Sorghum bicolor
Sobic.008G178901 5.0kb upstream 5.0kb upstream 5000   false Chr08: 61270293-61275292 Sorghum bicolor
Sobic.008G178901 5.0kb downstream 5.0kb downstream 7013   true Chr08: 61263280-61270292 Sorghum bicolor
Sobic.008G178901 5.0kb downstream 5.0kb downstream 5000   false Chr08: 61263280-61268279 Sorghum bicolor
Sobic.008G178901 10.0kb upstream 10.0kb upstream 12013   true Chr08: 61268280-61280292 Sorghum bicolor
Sobic.008G178901 10.0kb upstream 10.0kb upstream 10000   false Chr08: 61270293-61280292 Sorghum bicolor
Sobic.008G178901 10.0kb downstream 10.0kb downstream 12013   true Chr08: 61258280-61270292 Sorghum bicolor
Sobic.008G178901 10.0kb downstream 10.0kb downstream 10000   false Chr08: 61258280-61268279 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191341 5267 Panicoideae View MSA
124582666 5269 Grass View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.707        
cufflinks 0.158        
cufflinks 0.046     Low Low
cufflinks 0.037     Low Low
cufflinks 1.198        
cufflinks 0.263        
cufflinks 1.472       High
cufflinks 1.009        
cufflinks 0.122       Low
cufflinks 0.21        
cufflinks 3.112       High
cufflinks 1.068        
cufflinks 0.174        
cufflinks 1.918       High
cufflinks 0.12       Low
cufflinks 0.184        
cufflinks 0.794        
cufflinks 0.8        
cufflinks 0.181        
cufflinks 0.652        
cufflinks 0.065     Low Low
cufflinks 0.205        
cufflinks 0.951        
cufflinks 0.759        
cufflinks 0.186        
cufflinks 0.123       Low
cufflinks 1.112        
cufflinks 0.209        
cufflinks 2.514       High
cufflinks 0.114       Low

0 Strain