Gene : Sobic.010G152900 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR30620//PTHR30620:SF41 - PERIPLASMIC BETA-GLUCOSIDASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1613
Name:  ? Sobic.010G152900 Secondary Identifier:  ? PAC:37908591
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G152900 0.5kb upstream 0.5kb upstream 3629   true Chr10: 44511562-44515190 Sorghum bicolor
Sobic.010G152900 0.5kb upstream 0.5kb upstream 500   false Chr10: 44511562-44512061 Sorghum bicolor
Sobic.010G152900 0.5kb downstream 0.5kb downstream 3629   true Chr10: 44512062-44515690 Sorghum bicolor
Sobic.010G152900 0.5kb downstream 0.5kb downstream 500   false Chr10: 44515191-44515690 Sorghum bicolor
Sobic.010G152900 1.0kb upstream 1.0kb upstream 4129   true Chr10: 44511062-44515190 Sorghum bicolor
Sobic.010G152900 1.0kb upstream 1.0kb upstream 1000   false Chr10: 44511062-44512061 Sorghum bicolor
Sobic.010G152900 1.0kb downstream 1.0kb downstream 4129   true Chr10: 44512062-44516190 Sorghum bicolor
Sobic.010G152900 1.0kb downstream 1.0kb downstream 1000   false Chr10: 44515191-44516190 Sorghum bicolor
Sobic.010G152900 2.0kb upstream 2.0kb upstream 5129   true Chr10: 44510062-44515190 Sorghum bicolor
Sobic.010G152900 2.0kb upstream 2.0kb upstream 2000   false Chr10: 44510062-44512061 Sorghum bicolor
Sobic.010G152900 2.0kb downstream 2.0kb downstream 5129   true Chr10: 44512062-44517190 Sorghum bicolor
Sobic.010G152900 2.0kb downstream 2.0kb downstream 2000   false Chr10: 44515191-44517190 Sorghum bicolor
Sobic.010G152900 5.0kb upstream 5.0kb upstream 8129   true Chr10: 44507062-44515190 Sorghum bicolor
Sobic.010G152900 5.0kb upstream 5.0kb upstream 5000   false Chr10: 44507062-44512061 Sorghum bicolor
Sobic.010G152900 5.0kb downstream 5.0kb downstream 8129   true Chr10: 44512062-44520190 Sorghum bicolor
Sobic.010G152900 5.0kb downstream 5.0kb downstream 5000   false Chr10: 44515191-44520190 Sorghum bicolor
Sobic.010G152900 10.0kb upstream 10.0kb upstream 13129   true Chr10: 44502062-44515190 Sorghum bicolor
Sobic.010G152900 10.0kb upstream 10.0kb upstream 10000   false Chr10: 44502062-44512061 Sorghum bicolor
Sobic.010G152900 10.0kb downstream 10.0kb downstream 13129   true Chr10: 44512062-44525190 Sorghum bicolor
Sobic.010G152900 10.0kb downstream 10.0kb downstream 10000   false Chr10: 44515191-44525190 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192831 5267 Panicoideae View MSA
124573688 5269 Grass View MSA
122049455 5273 Angiosperm View MSA
121311411 5274 Embryophyte View MSA
123348711 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.164       High
cufflinks 0.012     Low  
cufflinks 0.064     Low High
cufflinks 0.013     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.003     Low Low

0 Strain