Gene : Sobic.008G188700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12313//PTHR12313:SF11 - RNF5 // SUBFAMILY NOT NAMED Genomic Order:  1978
Name:  ? Sobic.008G188700 Secondary Identifier:  ? PAC:37928011
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G188700 0.5kb upstream 0.5kb upstream 1540   true Chr08: 62303068-62304607 Sorghum bicolor
Sobic.008G188700 0.5kb upstream 0.5kb upstream 500   false Chr08: 62303068-62303567 Sorghum bicolor
Sobic.008G188700 0.5kb downstream 0.5kb downstream 1540   true Chr08: 62303568-62305107 Sorghum bicolor
Sobic.008G188700 0.5kb downstream 0.5kb downstream 500   false Chr08: 62304608-62305107 Sorghum bicolor
Sobic.008G188700 1.0kb upstream 1.0kb upstream 2040   true Chr08: 62302568-62304607 Sorghum bicolor
Sobic.008G188700 1.0kb upstream 1.0kb upstream 1000   false Chr08: 62302568-62303567 Sorghum bicolor
Sobic.008G188700 1.0kb downstream 1.0kb downstream 2040   true Chr08: 62303568-62305607 Sorghum bicolor
Sobic.008G188700 1.0kb downstream 1.0kb downstream 1000   false Chr08: 62304608-62305607 Sorghum bicolor
Sobic.008G188700 2.0kb upstream 2.0kb upstream 3040   true Chr08: 62301568-62304607 Sorghum bicolor
Sobic.008G188700 2.0kb upstream 2.0kb upstream 2000   false Chr08: 62301568-62303567 Sorghum bicolor
Sobic.008G188700 2.0kb downstream 2.0kb downstream 3040   true Chr08: 62303568-62306607 Sorghum bicolor
Sobic.008G188700 2.0kb downstream 2.0kb downstream 2000   false Chr08: 62304608-62306607 Sorghum bicolor
Sobic.008G188700 5.0kb upstream 5.0kb upstream 6040   true Chr08: 62298568-62304607 Sorghum bicolor
Sobic.008G188700 5.0kb upstream 5.0kb upstream 5000   false Chr08: 62298568-62303567 Sorghum bicolor
Sobic.008G188700 5.0kb downstream 5.0kb downstream 6040   true Chr08: 62303568-62309607 Sorghum bicolor
Sobic.008G188700 5.0kb downstream 5.0kb downstream 5000   false Chr08: 62304608-62309607 Sorghum bicolor
Sobic.008G188700 10.0kb upstream 10.0kb upstream 11040   true Chr08: 62293568-62304607 Sorghum bicolor
Sobic.008G188700 10.0kb upstream 10.0kb upstream 10000   false Chr08: 62293568-62303567 Sorghum bicolor
Sobic.008G188700 10.0kb downstream 10.0kb downstream 11040   true Chr08: 62303568-62314607 Sorghum bicolor
Sobic.008G188700 10.0kb downstream 10.0kb downstream 10000   false Chr08: 62304608-62314607 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185222 5267 Panicoideae View MSA
124569620 5269 Grass View MSA
122043579 5273 Angiosperm View MSA
121350090 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.654     High  
cufflinks 7.058     High Low
cufflinks 17.867     High Low
cufflinks 33.491     High  
cufflinks 25.205     High  
cufflinks 12.866       Low
cufflinks 31.226     High  
cufflinks 31.088     High  
cufflinks 43.884     High High
cufflinks 31.577     High  
cufflinks 31.814     High  
cufflinks 38.605     High  
cufflinks 23.616     High  
cufflinks 45.192     High High
cufflinks 22.342     High  
cufflinks 27.129     High  
cufflinks 40.782     High  
cufflinks 27.971     High  
cufflinks 19.637     High  
cufflinks 60.218     High High
cufflinks 12.514       Low
cufflinks 34.417     High  
cufflinks 35.506     High  
cufflinks 36.389     High  
cufflinks 23.85     High  
cufflinks 17.353     High Low
cufflinks 25.812     High  
cufflinks 73.665     High High
cufflinks 21.19     High  
cufflinks 28.17     High  

0 Strain