Gene : Sobic.008G192400 S. bicolor v3.1.1
Defline:  (1 of 5) PF00069//PF01453//PF08276 - Protein kinase domain (Pkinase) // D-mannose binding lectin (B_lectin) // PAN-like domain (PAN_2) Genomic Order:  2017
Name:  ? Sobic.008G192400 Secondary Identifier:  ? PAC:37926988
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G192400 0.5kb upstream 0.5kb upstream 3278   true Chr08: 62576825-62580102 Sorghum bicolor
Sobic.008G192400 0.5kb upstream 0.5kb upstream 500   false Chr08: 62579603-62580102 Sorghum bicolor
Sobic.008G192400 0.5kb downstream 0.5kb downstream 3278   true Chr08: 62576325-62579602 Sorghum bicolor
Sobic.008G192400 0.5kb downstream 0.5kb downstream 500   false Chr08: 62576325-62576824 Sorghum bicolor
Sobic.008G192400 1.0kb upstream 1.0kb upstream 3778   true Chr08: 62576825-62580602 Sorghum bicolor
Sobic.008G192400 1.0kb upstream 1.0kb upstream 1000   false Chr08: 62579603-62580602 Sorghum bicolor
Sobic.008G192400 1.0kb downstream 1.0kb downstream 3778   true Chr08: 62575825-62579602 Sorghum bicolor
Sobic.008G192400 1.0kb downstream 1.0kb downstream 1000   false Chr08: 62575825-62576824 Sorghum bicolor
Sobic.008G192400 2.0kb upstream 2.0kb upstream 4778   true Chr08: 62576825-62581602 Sorghum bicolor
Sobic.008G192400 2.0kb upstream 2.0kb upstream 2000   false Chr08: 62579603-62581602 Sorghum bicolor
Sobic.008G192400 2.0kb downstream 2.0kb downstream 4778   true Chr08: 62574825-62579602 Sorghum bicolor
Sobic.008G192400 2.0kb downstream 2.0kb downstream 2000   false Chr08: 62574825-62576824 Sorghum bicolor
Sobic.008G192400 5.0kb upstream 5.0kb upstream 7778   true Chr08: 62576825-62584602 Sorghum bicolor
Sobic.008G192400 5.0kb upstream 5.0kb upstream 5000   false Chr08: 62579603-62584602 Sorghum bicolor
Sobic.008G192400 5.0kb downstream 5.0kb downstream 7778   true Chr08: 62571825-62579602 Sorghum bicolor
Sobic.008G192400 5.0kb downstream 5.0kb downstream 5000   false Chr08: 62571825-62576824 Sorghum bicolor
Sobic.008G192400 10.0kb upstream 10.0kb upstream 12778   true Chr08: 62576825-62589602 Sorghum bicolor
Sobic.008G192400 10.0kb upstream 10.0kb upstream 10000   false Chr08: 62579603-62589602 Sorghum bicolor
Sobic.008G192400 10.0kb downstream 10.0kb downstream 12778   true Chr08: 62566825-62579602 Sorghum bicolor
Sobic.008G192400 10.0kb downstream 10.0kb downstream 10000   false Chr08: 62566825-62576824 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176957 5267 Panicoideae View MSA
124574978 5269 Grass View MSA
122046776 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.203        
cufflinks 0.01     Low Low
cufflinks 0.021     Low Low
cufflinks 0.018     Low Low
cufflinks 0.136        
cufflinks 0.045     Low  
cufflinks 0.117        
cufflinks 0.03     Low Low
cufflinks 0.106        
cufflinks 0.138        
cufflinks 0.973       High
cufflinks 2.034       High
cufflinks 0.087        
cufflinks 1.468       High
cufflinks 0.047     Low  
cufflinks 0.027     Low Low
cufflinks 0.045     Low  
cufflinks 0.033     Low  
cufflinks 0.076     Low  
cufflinks 0.055     Low  
cufflinks 0.158        
cufflinks 0.844       High
cufflinks 1.13       High
cufflinks 1.08       High
cufflinks 0.07        
cufflinks 0.02     Low Low
cufflinks 0.118        
cufflinks 0.106        
cufflinks 0.029     Low Low
cufflinks 0.214        

0 Strain