Gene : Sobic.010G147000 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR12446//PTHR12446:SF29 - TESMIN/TSO1-RELATED // SUBFAMILY NOT NAMED Genomic Order:  1551
Name:  ? Sobic.010G147000 Secondary Identifier:  ? PAC:37910449
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G147000 0.5kb upstream 0.5kb upstream 6460   true Chr10: 41921555-41928014 Sorghum bicolor
Sobic.010G147000 0.5kb upstream 0.5kb upstream 500   false Chr10: 41927515-41928014 Sorghum bicolor
Sobic.010G147000 0.5kb downstream 0.5kb downstream 6460   true Chr10: 41921055-41927514 Sorghum bicolor
Sobic.010G147000 0.5kb downstream 0.5kb downstream 500   false Chr10: 41921055-41921554 Sorghum bicolor
Sobic.010G147000 1.0kb upstream 1.0kb upstream 6960   true Chr10: 41921555-41928514 Sorghum bicolor
Sobic.010G147000 1.0kb upstream 1.0kb upstream 1000   false Chr10: 41927515-41928514 Sorghum bicolor
Sobic.010G147000 1.0kb downstream 1.0kb downstream 6960   true Chr10: 41920555-41927514 Sorghum bicolor
Sobic.010G147000 1.0kb downstream 1.0kb downstream 1000   false Chr10: 41920555-41921554 Sorghum bicolor
Sobic.010G147000 2.0kb upstream 2.0kb upstream 7960   true Chr10: 41921555-41929514 Sorghum bicolor
Sobic.010G147000 2.0kb upstream 2.0kb upstream 2000   false Chr10: 41927515-41929514 Sorghum bicolor
Sobic.010G147000 2.0kb downstream 2.0kb downstream 7960   true Chr10: 41919555-41927514 Sorghum bicolor
Sobic.010G147000 2.0kb downstream 2.0kb downstream 2000   false Chr10: 41919555-41921554 Sorghum bicolor
Sobic.010G147000 5.0kb upstream 5.0kb upstream 10960   true Chr10: 41921555-41932514 Sorghum bicolor
Sobic.010G147000 5.0kb upstream 5.0kb upstream 5000   false Chr10: 41927515-41932514 Sorghum bicolor
Sobic.010G147000 5.0kb downstream 5.0kb downstream 10960   true Chr10: 41916555-41927514 Sorghum bicolor
Sobic.010G147000 5.0kb downstream 5.0kb downstream 5000   false Chr10: 41916555-41921554 Sorghum bicolor
Sobic.010G147000 10.0kb upstream 10.0kb upstream 15960   true Chr10: 41921555-41937514 Sorghum bicolor
Sobic.010G147000 10.0kb upstream 10.0kb upstream 10000   false Chr10: 41927515-41937514 Sorghum bicolor
Sobic.010G147000 10.0kb downstream 10.0kb downstream 15960   true Chr10: 41911555-41927514 Sorghum bicolor
Sobic.010G147000 10.0kb downstream 10.0kb downstream 10000   false Chr10: 41911555-41921554 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179253 5267 Panicoideae View MSA
124570613 5269 Grass View MSA
122042831 5273 Angiosperm View MSA
121349847 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.415        
cufflinks 0.48        
cufflinks 0.909        
cufflinks 0.941       High
cufflinks 0.423        
cufflinks 0.999       High
cufflinks 0.738        
cufflinks 0.451        
cufflinks 1.132       High
cufflinks 1.107       High
cufflinks 0.753        
cufflinks 0.939       High
cufflinks 0.911       High
cufflinks 0.623        
cufflinks 0.995       High
cufflinks 0.646        
cufflinks 0.661        
cufflinks 0.701        
cufflinks 0.436        
cufflinks 0.741        
cufflinks 0.803        
cufflinks 0.558        
cufflinks 0.704        
cufflinks 0.68        
cufflinks 0.616        
cufflinks 0.429        
cufflinks 0.688        
cufflinks 0.229       Low
cufflinks 0.363       Low
cufflinks 0.895        

0 Strain