Gene : Sobic.010G139000 S. bicolor v3.1.1
Defline:  (1 of 1) K13123 - G patch domain-containing protein 1 (GPATCH1) Genomic Order:  1470
Name:  ? Sobic.010G139000 Secondary Identifier:  ? PAC:37910201
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G139000 0.5kb upstream 0.5kb upstream 16444   true Chr10: 23663674-23680117 Sorghum bicolor
Sobic.010G139000 0.5kb upstream 0.5kb upstream 500   false Chr10: 23663674-23664173 Sorghum bicolor
Sobic.010G139000 0.5kb downstream 0.5kb downstream 16444   true Chr10: 23664174-23680617 Sorghum bicolor
Sobic.010G139000 0.5kb downstream 0.5kb downstream 500   false Chr10: 23680118-23680617 Sorghum bicolor
Sobic.010G139000 1.0kb upstream 1.0kb upstream 16944   true Chr10: 23663174-23680117 Sorghum bicolor
Sobic.010G139000 1.0kb upstream 1.0kb upstream 1000   false Chr10: 23663174-23664173 Sorghum bicolor
Sobic.010G139000 1.0kb downstream 1.0kb downstream 16944   true Chr10: 23664174-23681117 Sorghum bicolor
Sobic.010G139000 1.0kb downstream 1.0kb downstream 1000   false Chr10: 23680118-23681117 Sorghum bicolor
Sobic.010G139000 2.0kb upstream 2.0kb upstream 17944   true Chr10: 23662174-23680117 Sorghum bicolor
Sobic.010G139000 2.0kb upstream 2.0kb upstream 2000   false Chr10: 23662174-23664173 Sorghum bicolor
Sobic.010G139000 2.0kb downstream 2.0kb downstream 17944   true Chr10: 23664174-23682117 Sorghum bicolor
Sobic.010G139000 2.0kb downstream 2.0kb downstream 2000   false Chr10: 23680118-23682117 Sorghum bicolor
Sobic.010G139000 5.0kb upstream 5.0kb upstream 20944   true Chr10: 23659174-23680117 Sorghum bicolor
Sobic.010G139000 5.0kb upstream 5.0kb upstream 5000   false Chr10: 23659174-23664173 Sorghum bicolor
Sobic.010G139000 5.0kb downstream 5.0kb downstream 20944   true Chr10: 23664174-23685117 Sorghum bicolor
Sobic.010G139000 5.0kb downstream 5.0kb downstream 5000   false Chr10: 23680118-23685117 Sorghum bicolor
Sobic.010G139000 10.0kb upstream 10.0kb upstream 25944   true Chr10: 23654174-23680117 Sorghum bicolor
Sobic.010G139000 10.0kb upstream 10.0kb upstream 10000   false Chr10: 23654174-23664173 Sorghum bicolor
Sobic.010G139000 10.0kb downstream 10.0kb downstream 25944   true Chr10: 23664174-23690117 Sorghum bicolor
Sobic.010G139000 10.0kb downstream 10.0kb downstream 10000   false Chr10: 23680118-23690117 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191598 5267 Panicoideae View MSA
124578949 5269 Grass View MSA
122044115 5273 Angiosperm View MSA
121345398 5274 Embryophyte View MSA
123424133 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.498       Low
cufflinks 1.845       Low
cufflinks 3.698        
cufflinks 3.856        
cufflinks 6.343       High
cufflinks 4.272        
cufflinks 2.89        
cufflinks 2.099       Low
cufflinks 6.238       High
cufflinks 5.273       High
cufflinks 3.385        
cufflinks 4.158        
cufflinks 3.807        
cufflinks 3.081        
cufflinks 4.543        
cufflinks 2.461       Low
cufflinks 2.912        
cufflinks 2.962        
cufflinks 3.595        
cufflinks 3.674        
cufflinks 8.23       High
cufflinks 3.113        
cufflinks 3.29        
cufflinks 3.258        
cufflinks 4.086        
cufflinks 2.078       Low
cufflinks 4.547        
cufflinks 3.429        
cufflinks 3.331        
cufflinks 5.383       High

0 Strain