Gene : Sobic.008G136601 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR22504 - REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 Genomic Order:  1436
Name:  ? Sobic.008G136601 Secondary Identifier:  ? PAC:37927645
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G136601 0.5kb upstream 0.5kb upstream 6244   true Chr08: 56579785-56586028 Sorghum bicolor
Sobic.008G136601 0.5kb upstream 0.5kb upstream 500   false Chr08: 56579785-56580284 Sorghum bicolor
Sobic.008G136601 0.5kb downstream 0.5kb downstream 6244   true Chr08: 56580285-56586528 Sorghum bicolor
Sobic.008G136601 0.5kb downstream 0.5kb downstream 500   false Chr08: 56586029-56586528 Sorghum bicolor
Sobic.008G136601 1.0kb upstream 1.0kb upstream 6744   true Chr08: 56579285-56586028 Sorghum bicolor
Sobic.008G136601 1.0kb upstream 1.0kb upstream 1000   false Chr08: 56579285-56580284 Sorghum bicolor
Sobic.008G136601 1.0kb downstream 1.0kb downstream 6744   true Chr08: 56580285-56587028 Sorghum bicolor
Sobic.008G136601 1.0kb downstream 1.0kb downstream 1000   false Chr08: 56586029-56587028 Sorghum bicolor
Sobic.008G136601 2.0kb upstream 2.0kb upstream 7744   true Chr08: 56578285-56586028 Sorghum bicolor
Sobic.008G136601 2.0kb upstream 2.0kb upstream 2000   false Chr08: 56578285-56580284 Sorghum bicolor
Sobic.008G136601 2.0kb downstream 2.0kb downstream 7744   true Chr08: 56580285-56588028 Sorghum bicolor
Sobic.008G136601 2.0kb downstream 2.0kb downstream 2000   false Chr08: 56586029-56588028 Sorghum bicolor
Sobic.008G136601 5.0kb upstream 5.0kb upstream 10744   true Chr08: 56575285-56586028 Sorghum bicolor
Sobic.008G136601 5.0kb upstream 5.0kb upstream 5000   false Chr08: 56575285-56580284 Sorghum bicolor
Sobic.008G136601 5.0kb downstream 5.0kb downstream 10744   true Chr08: 56580285-56591028 Sorghum bicolor
Sobic.008G136601 5.0kb downstream 5.0kb downstream 5000   false Chr08: 56586029-56591028 Sorghum bicolor
Sobic.008G136601 10.0kb upstream 10.0kb upstream 15744   true Chr08: 56570285-56586028 Sorghum bicolor
Sobic.008G136601 10.0kb upstream 10.0kb upstream 10000   false Chr08: 56570285-56580284 Sorghum bicolor
Sobic.008G136601 10.0kb downstream 10.0kb downstream 15744   true Chr08: 56580285-56596028 Sorghum bicolor
Sobic.008G136601 10.0kb downstream 10.0kb downstream 10000   false Chr08: 56586029-56596028 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191503 5267 Panicoideae View MSA
124573497 5269 Grass View MSA
122047316 5273 Angiosperm View MSA
121345866 5274 Embryophyte View MSA
123424535 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.203       Low
cufflinks 0.665        
cufflinks 1.034        
cufflinks 0.89        
cufflinks 0.384        
cufflinks 1.455       High
cufflinks 0.735        
cufflinks 0.573        
cufflinks 0.607        
cufflinks 0.622        
cufflinks 0.29        
cufflinks 0.284        
cufflinks 0.666        
cufflinks 0.215       Low
cufflinks 7.759       High
cufflinks 1.078       High
cufflinks 0.89        
cufflinks 1.056       High
cufflinks 0.684        
cufflinks 0.811        
cufflinks 0.831        
cufflinks 0.203       Low
cufflinks 0.335        
cufflinks 0.216       Low
cufflinks 0.601        
cufflinks 0.531        
cufflinks 0.284        
cufflinks 0.139       Low
cufflinks 0.548        
cufflinks 0.635        

0 Strain