Gene : Sobic.008G142600 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11785//PTHR11785:SF366 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  1503
Name:  ? Sobic.008G142600 Secondary Identifier:  ? PAC:37926612
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G142600 0.5kb upstream 0.5kb upstream 3029   true Chr08: 57419065-57422093 Sorghum bicolor
Sobic.008G142600 0.5kb upstream 0.5kb upstream 500   false Chr08: 57419065-57419564 Sorghum bicolor
Sobic.008G142600 0.5kb downstream 0.5kb downstream 3029   true Chr08: 57419565-57422593 Sorghum bicolor
Sobic.008G142600 0.5kb downstream 0.5kb downstream 500   false Chr08: 57422094-57422593 Sorghum bicolor
Sobic.008G142600 1.0kb upstream 1.0kb upstream 3529   true Chr08: 57418565-57422093 Sorghum bicolor
Sobic.008G142600 1.0kb upstream 1.0kb upstream 1000   false Chr08: 57418565-57419564 Sorghum bicolor
Sobic.008G142600 1.0kb downstream 1.0kb downstream 3529   true Chr08: 57419565-57423093 Sorghum bicolor
Sobic.008G142600 1.0kb downstream 1.0kb downstream 1000   false Chr08: 57422094-57423093 Sorghum bicolor
Sobic.008G142600 2.0kb upstream 2.0kb upstream 4529   true Chr08: 57417565-57422093 Sorghum bicolor
Sobic.008G142600 2.0kb upstream 2.0kb upstream 2000   false Chr08: 57417565-57419564 Sorghum bicolor
Sobic.008G142600 2.0kb downstream 2.0kb downstream 4529   true Chr08: 57419565-57424093 Sorghum bicolor
Sobic.008G142600 2.0kb downstream 2.0kb downstream 2000   false Chr08: 57422094-57424093 Sorghum bicolor
Sobic.008G142600 5.0kb upstream 5.0kb upstream 7529   true Chr08: 57414565-57422093 Sorghum bicolor
Sobic.008G142600 5.0kb upstream 5.0kb upstream 5000   false Chr08: 57414565-57419564 Sorghum bicolor
Sobic.008G142600 5.0kb downstream 5.0kb downstream 7529   true Chr08: 57419565-57427093 Sorghum bicolor
Sobic.008G142600 5.0kb downstream 5.0kb downstream 5000   false Chr08: 57422094-57427093 Sorghum bicolor
Sobic.008G142600 10.0kb upstream 10.0kb upstream 12529   true Chr08: 57409565-57422093 Sorghum bicolor
Sobic.008G142600 10.0kb upstream 10.0kb upstream 10000   false Chr08: 57409565-57419564 Sorghum bicolor
Sobic.008G142600 10.0kb downstream 10.0kb downstream 12529   true Chr08: 57419565-57432093 Sorghum bicolor
Sobic.008G142600 10.0kb downstream 10.0kb downstream 10000   false Chr08: 57422094-57432093 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188994 5267 Panicoideae View MSA
124579195 5269 Grass View MSA
122042017 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.353       Low
cufflinks 1.006       Low
cufflinks 0.746       Low
cufflinks 3.214        
cufflinks 1.746        
cufflinks 2.558        
cufflinks 2.428        
cufflinks 4.122        
cufflinks 2.553        
cufflinks 2.552        
cufflinks 4.07        
cufflinks 7.25       High
cufflinks 1.716        
cufflinks 7.305       High
cufflinks 1.361        
cufflinks 1.679        
cufflinks 2.749        
cufflinks 2.529        
cufflinks 1.566        
cufflinks 3.419        
cufflinks 0.511       Low
cufflinks 5.314        
cufflinks 6.188       High
cufflinks 5.491        
cufflinks 1.778        
cufflinks 0.974       Low
cufflinks 3.079        
cufflinks 0.087       Low
cufflinks 5.395        
cufflinks 1.827        

0 Strain