Gene : Sobic.008G145300 S. bicolor v3.1.1
Defline:  (1 of 12) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  1530
Name:  ? Sobic.008G145300 Secondary Identifier:  ? PAC:37927361
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G145300 0.5kb upstream 0.5kb upstream 5429   true Chr08: 57669834-57675262 Sorghum bicolor
Sobic.008G145300 0.5kb upstream 0.5kb upstream 500   false Chr08: 57674763-57675262 Sorghum bicolor
Sobic.008G145300 0.5kb downstream 0.5kb downstream 5429   true Chr08: 57669334-57674762 Sorghum bicolor
Sobic.008G145300 0.5kb downstream 0.5kb downstream 500   false Chr08: 57669334-57669833 Sorghum bicolor
Sobic.008G145300 1.0kb upstream 1.0kb upstream 5929   true Chr08: 57669834-57675762 Sorghum bicolor
Sobic.008G145300 1.0kb upstream 1.0kb upstream 1000   false Chr08: 57674763-57675762 Sorghum bicolor
Sobic.008G145300 1.0kb downstream 1.0kb downstream 5929   true Chr08: 57668834-57674762 Sorghum bicolor
Sobic.008G145300 1.0kb downstream 1.0kb downstream 1000   false Chr08: 57668834-57669833 Sorghum bicolor
Sobic.008G145300 2.0kb upstream 2.0kb upstream 6929   true Chr08: 57669834-57676762 Sorghum bicolor
Sobic.008G145300 2.0kb upstream 2.0kb upstream 2000   false Chr08: 57674763-57676762 Sorghum bicolor
Sobic.008G145300 2.0kb downstream 2.0kb downstream 6929   true Chr08: 57667834-57674762 Sorghum bicolor
Sobic.008G145300 2.0kb downstream 2.0kb downstream 2000   false Chr08: 57667834-57669833 Sorghum bicolor
Sobic.008G145300 5.0kb upstream 5.0kb upstream 9929   true Chr08: 57669834-57679762 Sorghum bicolor
Sobic.008G145300 5.0kb upstream 5.0kb upstream 5000   false Chr08: 57674763-57679762 Sorghum bicolor
Sobic.008G145300 5.0kb downstream 5.0kb downstream 9929   true Chr08: 57664834-57674762 Sorghum bicolor
Sobic.008G145300 5.0kb downstream 5.0kb downstream 5000   false Chr08: 57664834-57669833 Sorghum bicolor
Sobic.008G145300 10.0kb upstream 10.0kb upstream 14929   true Chr08: 57669834-57684762 Sorghum bicolor
Sobic.008G145300 10.0kb upstream 10.0kb upstream 10000   false Chr08: 57674763-57684762 Sorghum bicolor
Sobic.008G145300 10.0kb downstream 10.0kb downstream 14929   true Chr08: 57659834-57674762 Sorghum bicolor
Sobic.008G145300 10.0kb downstream 10.0kb downstream 10000   false Chr08: 57659834-57669833 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181713 5267 Panicoideae View MSA
124585898 5269 Grass View MSA
122047329 5273 Angiosperm View MSA
121350883 5274 Embryophyte View MSA
123381921 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.063     Low  
cufflinks 0.022     Low Low
cufflinks 0.009     Low Low
cufflinks 0.008     Low Low
cufflinks 0.183        
cufflinks 0.126        
cufflinks 1.178        
cufflinks 0.847        
cufflinks 0.05     Low Low
cufflinks 0.096        
cufflinks 0.624        
cufflinks 0.512        
cufflinks 0.62        
cufflinks 0.721        
cufflinks 1.163        
cufflinks 0.031     Low Low
cufflinks 1.172        
cufflinks 1.188        
cufflinks 0.056     Low  
cufflinks 0.967        
cufflinks 0.321        
cufflinks 2.032       High
cufflinks 0.698        
cufflinks 0.858        
cufflinks 0.071        
cufflinks 0.022     Low Low
cufflinks 0.13        
cufflinks 0.007     Low Low
cufflinks 2.016       High
cufflinks 0.92        

0 Strain