Gene : Sobic.008G147200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR13391 - TUBULIN-RELATED PROTEIN Genomic Order:  1545
Name:  ? Sobic.008G147200 Secondary Identifier:  ? PAC:37927199
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G147200 0.5kb upstream 0.5kb upstream 4996   true Chr08: 58082592-58087587 Sorghum bicolor
Sobic.008G147200 0.5kb upstream 0.5kb upstream 500   false Chr08: 58082592-58083091 Sorghum bicolor
Sobic.008G147200 0.5kb downstream 0.5kb downstream 4996   true Chr08: 58083092-58088087 Sorghum bicolor
Sobic.008G147200 0.5kb downstream 0.5kb downstream 500   false Chr08: 58087588-58088087 Sorghum bicolor
Sobic.008G147200 1.0kb upstream 1.0kb upstream 5496   true Chr08: 58082092-58087587 Sorghum bicolor
Sobic.008G147200 1.0kb upstream 1.0kb upstream 1000   false Chr08: 58082092-58083091 Sorghum bicolor
Sobic.008G147200 1.0kb downstream 1.0kb downstream 5496   true Chr08: 58083092-58088587 Sorghum bicolor
Sobic.008G147200 1.0kb downstream 1.0kb downstream 1000   false Chr08: 58087588-58088587 Sorghum bicolor
Sobic.008G147200 2.0kb upstream 2.0kb upstream 6496   true Chr08: 58081092-58087587 Sorghum bicolor
Sobic.008G147200 2.0kb upstream 2.0kb upstream 2000   false Chr08: 58081092-58083091 Sorghum bicolor
Sobic.008G147200 2.0kb downstream 2.0kb downstream 6496   true Chr08: 58083092-58089587 Sorghum bicolor
Sobic.008G147200 2.0kb downstream 2.0kb downstream 2000   false Chr08: 58087588-58089587 Sorghum bicolor
Sobic.008G147200 5.0kb upstream 5.0kb upstream 9496   true Chr08: 58078092-58087587 Sorghum bicolor
Sobic.008G147200 5.0kb upstream 5.0kb upstream 5000   false Chr08: 58078092-58083091 Sorghum bicolor
Sobic.008G147200 5.0kb downstream 5.0kb downstream 9496   true Chr08: 58083092-58092587 Sorghum bicolor
Sobic.008G147200 5.0kb downstream 5.0kb downstream 5000   false Chr08: 58087588-58092587 Sorghum bicolor
Sobic.008G147200 10.0kb upstream 10.0kb upstream 14496   true Chr08: 58073092-58087587 Sorghum bicolor
Sobic.008G147200 10.0kb upstream 10.0kb upstream 10000   false Chr08: 58073092-58083091 Sorghum bicolor
Sobic.008G147200 10.0kb downstream 10.0kb downstream 14496   true Chr08: 58083092-58097587 Sorghum bicolor
Sobic.008G147200 10.0kb downstream 10.0kb downstream 10000   false Chr08: 58087588-58097587 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178260 5267 Panicoideae View MSA
124581272 5269 Grass View MSA
122047686 5273 Angiosperm View MSA
121346251 5274 Embryophyte View MSA
123424627 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.776        
cufflinks 0.797       Low
cufflinks 1.734       Low
cufflinks 3.055        
cufflinks 6.4        
cufflinks 5.624        
cufflinks 3.219        
cufflinks 1.264       Low
cufflinks 8.115       High
cufflinks 7.557       High
cufflinks 4.164        
cufflinks 4.445        
cufflinks 4.978        
cufflinks 5.07        
cufflinks 3.954        
cufflinks 1.052       Low
cufflinks 3.019        
cufflinks 3.067        
cufflinks 1.989       Low
cufflinks 3.129        
cufflinks 11.069       High
cufflinks 5.464        
cufflinks 5.38        
cufflinks 5.352        
cufflinks 1.994       Low
cufflinks 0.962       Low
cufflinks 4.275        
cufflinks 10.243     High High
cufflinks 2.539        
cufflinks 5.723        

0 Strain