Gene : Sobic.010G189500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR31636:SF2 - SCARECROW-LIKE PROTEIN 18 Genomic Order:  2001
Name:  ? Sobic.010G189500 Secondary Identifier:  ? PAC:37912196
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G189500 0.5kb upstream 0.5kb upstream 9256   true Chr10: 53012873-53022128 Sorghum bicolor
Sobic.010G189500 0.5kb upstream 0.5kb upstream 500   false Chr10: 53012873-53013372 Sorghum bicolor
Sobic.010G189500 0.5kb downstream 0.5kb downstream 9256   true Chr10: 53013373-53022628 Sorghum bicolor
Sobic.010G189500 0.5kb downstream 0.5kb downstream 500   false Chr10: 53022129-53022628 Sorghum bicolor
Sobic.010G189500 1.0kb upstream 1.0kb upstream 9756   true Chr10: 53012373-53022128 Sorghum bicolor
Sobic.010G189500 1.0kb upstream 1.0kb upstream 1000   false Chr10: 53012373-53013372 Sorghum bicolor
Sobic.010G189500 1.0kb downstream 1.0kb downstream 9756   true Chr10: 53013373-53023128 Sorghum bicolor
Sobic.010G189500 1.0kb downstream 1.0kb downstream 1000   false Chr10: 53022129-53023128 Sorghum bicolor
Sobic.010G189500 2.0kb upstream 2.0kb upstream 10756   true Chr10: 53011373-53022128 Sorghum bicolor
Sobic.010G189500 2.0kb upstream 2.0kb upstream 2000   false Chr10: 53011373-53013372 Sorghum bicolor
Sobic.010G189500 2.0kb downstream 2.0kb downstream 10756   true Chr10: 53013373-53024128 Sorghum bicolor
Sobic.010G189500 2.0kb downstream 2.0kb downstream 2000   false Chr10: 53022129-53024128 Sorghum bicolor
Sobic.010G189500 5.0kb upstream 5.0kb upstream 13756   true Chr10: 53008373-53022128 Sorghum bicolor
Sobic.010G189500 5.0kb upstream 5.0kb upstream 5000   false Chr10: 53008373-53013372 Sorghum bicolor
Sobic.010G189500 5.0kb downstream 5.0kb downstream 13756   true Chr10: 53013373-53027128 Sorghum bicolor
Sobic.010G189500 5.0kb downstream 5.0kb downstream 5000   false Chr10: 53022129-53027128 Sorghum bicolor
Sobic.010G189500 10.0kb upstream 10.0kb upstream 18756   true Chr10: 53003373-53022128 Sorghum bicolor
Sobic.010G189500 10.0kb upstream 10.0kb upstream 10000   false Chr10: 53003373-53013372 Sorghum bicolor
Sobic.010G189500 10.0kb downstream 10.0kb downstream 18756   true Chr10: 53013373-53032128 Sorghum bicolor
Sobic.010G189500 10.0kb downstream 10.0kb downstream 10000   false Chr10: 53022129-53032128 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189874 5267 Panicoideae View MSA
124585376 5269 Grass View MSA
122041925 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.154        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.006     Low Low
cufflinks 0.132        
cufflinks 0.164        
cufflinks 0.072     Low  
cufflinks 0.102     Low  
cufflinks 0.137        
cufflinks 0.088     Low  
cufflinks 0.099        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.937       High
cufflinks 0.066     Low  
cufflinks 0.058     Low  
cufflinks 0.049     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.005     Low Low
cufflinks 0.017     Low  
cufflinks 0.153        

0 Strain