Gene : Sobic.010G185700 S. bicolor v3.1.1
Defline:  (1 of 1) PF00153//PF13833 - Mitochondrial carrier protein (Mito_carr) // EF-hand domain pair (EF-hand_8) Genomic Order:  1960
Name:  ? Sobic.010G185700 Secondary Identifier:  ? PAC:37908704
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G185700 0.5kb upstream 0.5kb upstream 11582   true Chr10: 52580777-52592358 Sorghum bicolor
Sobic.010G185700 0.5kb upstream 0.5kb upstream 500   false Chr10: 52580777-52581276 Sorghum bicolor
Sobic.010G185700 0.5kb downstream 0.5kb downstream 11582   true Chr10: 52581277-52592858 Sorghum bicolor
Sobic.010G185700 0.5kb downstream 0.5kb downstream 500   false Chr10: 52592359-52592858 Sorghum bicolor
Sobic.010G185700 1.0kb upstream 1.0kb upstream 12082   true Chr10: 52580277-52592358 Sorghum bicolor
Sobic.010G185700 1.0kb upstream 1.0kb upstream 1000   false Chr10: 52580277-52581276 Sorghum bicolor
Sobic.010G185700 1.0kb downstream 1.0kb downstream 12082   true Chr10: 52581277-52593358 Sorghum bicolor
Sobic.010G185700 1.0kb downstream 1.0kb downstream 1000   false Chr10: 52592359-52593358 Sorghum bicolor
Sobic.010G185700 2.0kb upstream 2.0kb upstream 13082   true Chr10: 52579277-52592358 Sorghum bicolor
Sobic.010G185700 2.0kb upstream 2.0kb upstream 2000   false Chr10: 52579277-52581276 Sorghum bicolor
Sobic.010G185700 2.0kb downstream 2.0kb downstream 13082   true Chr10: 52581277-52594358 Sorghum bicolor
Sobic.010G185700 2.0kb downstream 2.0kb downstream 2000   false Chr10: 52592359-52594358 Sorghum bicolor
Sobic.010G185700 5.0kb upstream 5.0kb upstream 16082   true Chr10: 52576277-52592358 Sorghum bicolor
Sobic.010G185700 5.0kb upstream 5.0kb upstream 5000   false Chr10: 52576277-52581276 Sorghum bicolor
Sobic.010G185700 5.0kb downstream 5.0kb downstream 16082   true Chr10: 52581277-52597358 Sorghum bicolor
Sobic.010G185700 5.0kb downstream 5.0kb downstream 5000   false Chr10: 52592359-52597358 Sorghum bicolor
Sobic.010G185700 10.0kb upstream 10.0kb upstream 21082   true Chr10: 52571277-52592358 Sorghum bicolor
Sobic.010G185700 10.0kb upstream 10.0kb upstream 10000   false Chr10: 52571277-52581276 Sorghum bicolor
Sobic.010G185700 10.0kb downstream 10.0kb downstream 21082   true Chr10: 52581277-52602358 Sorghum bicolor
Sobic.010G185700 10.0kb downstream 10.0kb downstream 10000   false Chr10: 52592359-52602358 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193436 5267 Panicoideae View MSA
124588022 5269 Grass View MSA
122042034 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121349229 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.092       Low
cufflinks 5.723        
cufflinks 11.209     High High
cufflinks 4.232        
cufflinks 5.575        
cufflinks 4.936        
cufflinks 5.13        
cufflinks 4.37        
cufflinks 3.392        
cufflinks 3.81        
cufflinks 4.283        
cufflinks 3.107       Low
cufflinks 5.391        
cufflinks 3.212       Low
cufflinks 5.265        
cufflinks 7.827       High
cufflinks 5.282        
cufflinks 4.652        
cufflinks 8.27       High
cufflinks 4.558        
cufflinks 5.267        
cufflinks 3.264       Low
cufflinks 3.994        
cufflinks 3.921        
cufflinks 4.075        
cufflinks 4.322        
cufflinks 4.0        
cufflinks 3.325       Low
cufflinks 6.32        
cufflinks 3.974        

0 Strain