Gene : Sobic.008G152900 S. bicolor v3.1.1
Defline:  (1 of 53) PF00917 - MATH domain (MATH) Genomic Order:  1600
Name:  ? Sobic.008G152900 Secondary Identifier:  ? PAC:37926731
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G152900 0.5kb upstream 0.5kb upstream 7930   true Chr08: 58524428-58532357 Sorghum bicolor
Sobic.008G152900 0.5kb upstream 0.5kb upstream 500   false Chr08: 58524428-58524927 Sorghum bicolor
Sobic.008G152900 0.5kb downstream 0.5kb downstream 7930   true Chr08: 58524928-58532857 Sorghum bicolor
Sobic.008G152900 0.5kb downstream 0.5kb downstream 500   false Chr08: 58532358-58532857 Sorghum bicolor
Sobic.008G152900 1.0kb upstream 1.0kb upstream 8430   true Chr08: 58523928-58532357 Sorghum bicolor
Sobic.008G152900 1.0kb upstream 1.0kb upstream 1000   false Chr08: 58523928-58524927 Sorghum bicolor
Sobic.008G152900 1.0kb downstream 1.0kb downstream 8430   true Chr08: 58524928-58533357 Sorghum bicolor
Sobic.008G152900 1.0kb downstream 1.0kb downstream 1000   false Chr08: 58532358-58533357 Sorghum bicolor
Sobic.008G152900 2.0kb upstream 2.0kb upstream 9430   true Chr08: 58522928-58532357 Sorghum bicolor
Sobic.008G152900 2.0kb upstream 2.0kb upstream 2000   false Chr08: 58522928-58524927 Sorghum bicolor
Sobic.008G152900 2.0kb downstream 2.0kb downstream 9430   true Chr08: 58524928-58534357 Sorghum bicolor
Sobic.008G152900 2.0kb downstream 2.0kb downstream 2000   false Chr08: 58532358-58534357 Sorghum bicolor
Sobic.008G152900 5.0kb upstream 5.0kb upstream 12430   true Chr08: 58519928-58532357 Sorghum bicolor
Sobic.008G152900 5.0kb upstream 5.0kb upstream 5000   false Chr08: 58519928-58524927 Sorghum bicolor
Sobic.008G152900 5.0kb downstream 5.0kb downstream 12430   true Chr08: 58524928-58537357 Sorghum bicolor
Sobic.008G152900 5.0kb downstream 5.0kb downstream 5000   false Chr08: 58532358-58537357 Sorghum bicolor
Sobic.008G152900 10.0kb upstream 10.0kb upstream 17430   true Chr08: 58514928-58532357 Sorghum bicolor
Sobic.008G152900 10.0kb upstream 10.0kb upstream 10000   false Chr08: 58514928-58524927 Sorghum bicolor
Sobic.008G152900 10.0kb downstream 10.0kb downstream 17430   true Chr08: 58524928-58542357 Sorghum bicolor
Sobic.008G152900 10.0kb downstream 10.0kb downstream 10000   false Chr08: 58532358-58542357 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026595 5273 Angiosperm View MSA
122174372 5267 Panicoideae View MSA
124464886 5269 Grass View MSA
123429159 5275 Viridiplantae View MSA
121296410 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.549        
cufflinks 0.277       Low
cufflinks 0.377       Low
cufflinks 0.612        
cufflinks 0.672        
cufflinks 1.12       High
cufflinks 0.505        
cufflinks 0.362       Low
cufflinks 0.877        
cufflinks 0.825        
cufflinks 0.68        
cufflinks 0.807        
cufflinks 0.61        
cufflinks 0.581        
cufflinks 0.89       High
cufflinks 0.548        
cufflinks 0.543        
cufflinks 0.623        
cufflinks 0.693        
cufflinks 0.801        
cufflinks 1.195       High
cufflinks 1.077       High
cufflinks 0.654        
cufflinks 0.563        
cufflinks 0.422        
cufflinks 0.288       Low
cufflinks 1.071       High
cufflinks 0.461        
cufflinks 0.488        
cufflinks 1.016       High

0 Strain