Gene : Sobic.010G179700 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11941//PTHR11941:SF47 - ENOYL-COA HYDRATASE-RELATED // 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 3, MITOCHONDRIAL-RELATED Genomic Order:  1894
Name:  ? Sobic.010G179700 Secondary Identifier:  ? PAC:37910973
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-7574 Sorghum bicolor pathologic  
Sbicolor VALDEG-PWY Sorghum bicolor pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G179700 0.5kb upstream 0.5kb upstream 7390   true Chr10: 51775020-51782409 Sorghum bicolor
Sobic.010G179700 0.5kb upstream 0.5kb upstream 500   false Chr10: 51775020-51775519 Sorghum bicolor
Sobic.010G179700 0.5kb downstream 0.5kb downstream 7390   true Chr10: 51775520-51782909 Sorghum bicolor
Sobic.010G179700 0.5kb downstream 0.5kb downstream 500   false Chr10: 51782410-51782909 Sorghum bicolor
Sobic.010G179700 1.0kb upstream 1.0kb upstream 7890   true Chr10: 51774520-51782409 Sorghum bicolor
Sobic.010G179700 1.0kb upstream 1.0kb upstream 1000   false Chr10: 51774520-51775519 Sorghum bicolor
Sobic.010G179700 1.0kb downstream 1.0kb downstream 7890   true Chr10: 51775520-51783409 Sorghum bicolor
Sobic.010G179700 1.0kb downstream 1.0kb downstream 1000   false Chr10: 51782410-51783409 Sorghum bicolor
Sobic.010G179700 2.0kb upstream 2.0kb upstream 8890   true Chr10: 51773520-51782409 Sorghum bicolor
Sobic.010G179700 2.0kb upstream 2.0kb upstream 2000   false Chr10: 51773520-51775519 Sorghum bicolor
Sobic.010G179700 2.0kb downstream 2.0kb downstream 8890   true Chr10: 51775520-51784409 Sorghum bicolor
Sobic.010G179700 2.0kb downstream 2.0kb downstream 2000   false Chr10: 51782410-51784409 Sorghum bicolor
Sobic.010G179700 5.0kb upstream 5.0kb upstream 11890   true Chr10: 51770520-51782409 Sorghum bicolor
Sobic.010G179700 5.0kb upstream 5.0kb upstream 5000   false Chr10: 51770520-51775519 Sorghum bicolor
Sobic.010G179700 5.0kb downstream 5.0kb downstream 11890   true Chr10: 51775520-51787409 Sorghum bicolor
Sobic.010G179700 5.0kb downstream 5.0kb downstream 5000   false Chr10: 51782410-51787409 Sorghum bicolor
Sobic.010G179700 10.0kb upstream 10.0kb upstream 16890   true Chr10: 51765520-51782409 Sorghum bicolor
Sobic.010G179700 10.0kb upstream 10.0kb upstream 10000   false Chr10: 51765520-51775519 Sorghum bicolor
Sobic.010G179700 10.0kb downstream 10.0kb downstream 16890   true Chr10: 51775520-51792409 Sorghum bicolor
Sobic.010G179700 10.0kb downstream 10.0kb downstream 10000   false Chr10: 51782410-51792409 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188018 5267 Panicoideae View MSA
124571553 5269 Grass View MSA
122043157 5273 Angiosperm View MSA
121344613 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.682       Low
cufflinks 1.059       Low
cufflinks 1.59        
cufflinks 2.241        
cufflinks 3.527        
cufflinks 2.569        
cufflinks 2.152        
cufflinks 1.783        
cufflinks 3.2        
cufflinks 3.653        
cufflinks 2.792        
cufflinks 3.117        
cufflinks 3.134        
cufflinks 3.168        
cufflinks 3.616        
cufflinks 1.514       Low
cufflinks 2.034        
cufflinks 2.356        
cufflinks 1.48       Low
cufflinks 2.287        
cufflinks 3.69        
cufflinks 3.291        
cufflinks 3.159        
cufflinks 3.104        
cufflinks 1.345       Low
cufflinks 1.126       Low
cufflinks 3.395        
cufflinks 0.653       Low
cufflinks 2.301        
cufflinks 3.855       High

0 Strain