Gene : Sobic.010G180800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR22891//PTHR22891:SF25 - EUKARYOTIC TRANSLATION INITIATION FACTOR 2C // SUBFAMILY NOT NAMED Genomic Order:  1909
Name:  ? Sobic.010G180800 Secondary Identifier:  ? PAC:37909712
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G180800 0.5kb upstream 0.5kb upstream 14295   true Chr10: 52023106-52037400 Sorghum bicolor
Sobic.010G180800 0.5kb upstream 0.5kb upstream 500   false Chr10: 52023106-52023605 Sorghum bicolor
Sobic.010G180800 0.5kb downstream 0.5kb downstream 14295   true Chr10: 52023606-52037900 Sorghum bicolor
Sobic.010G180800 0.5kb downstream 0.5kb downstream 500   false Chr10: 52037401-52037900 Sorghum bicolor
Sobic.010G180800 1.0kb upstream 1.0kb upstream 14795   true Chr10: 52022606-52037400 Sorghum bicolor
Sobic.010G180800 1.0kb upstream 1.0kb upstream 1000   false Chr10: 52022606-52023605 Sorghum bicolor
Sobic.010G180800 1.0kb downstream 1.0kb downstream 14795   true Chr10: 52023606-52038400 Sorghum bicolor
Sobic.010G180800 1.0kb downstream 1.0kb downstream 1000   false Chr10: 52037401-52038400 Sorghum bicolor
Sobic.010G180800 2.0kb upstream 2.0kb upstream 15795   true Chr10: 52021606-52037400 Sorghum bicolor
Sobic.010G180800 2.0kb upstream 2.0kb upstream 2000   false Chr10: 52021606-52023605 Sorghum bicolor
Sobic.010G180800 2.0kb downstream 2.0kb downstream 15795   true Chr10: 52023606-52039400 Sorghum bicolor
Sobic.010G180800 2.0kb downstream 2.0kb downstream 2000   false Chr10: 52037401-52039400 Sorghum bicolor
Sobic.010G180800 5.0kb upstream 5.0kb upstream 18795   true Chr10: 52018606-52037400 Sorghum bicolor
Sobic.010G180800 5.0kb upstream 5.0kb upstream 5000   false Chr10: 52018606-52023605 Sorghum bicolor
Sobic.010G180800 5.0kb downstream 5.0kb downstream 18795   true Chr10: 52023606-52042400 Sorghum bicolor
Sobic.010G180800 5.0kb downstream 5.0kb downstream 5000   false Chr10: 52037401-52042400 Sorghum bicolor
Sobic.010G180800 10.0kb upstream 10.0kb upstream 23795   true Chr10: 52013606-52037400 Sorghum bicolor
Sobic.010G180800 10.0kb upstream 10.0kb upstream 10000   false Chr10: 52013606-52023605 Sorghum bicolor
Sobic.010G180800 10.0kb downstream 10.0kb downstream 23795   true Chr10: 52023606-52047400 Sorghum bicolor
Sobic.010G180800 10.0kb downstream 10.0kb downstream 10000   false Chr10: 52037401-52047400 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122197011 5267 Panicoideae View MSA
124570369 5269 Grass View MSA
122045279 5273 Angiosperm View MSA
121345149 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.43        
cufflinks 0.79       Low
cufflinks 1.964        
cufflinks 1.049        
cufflinks 4.466       High
cufflinks 1.965        
cufflinks 3.897       High
cufflinks 1.379        
cufflinks 1.252        
cufflinks 1.015        
cufflinks 1.85        
cufflinks 1.836        
cufflinks 2.093        
cufflinks 1.138        
cufflinks 2.127        
cufflinks 0.791       Low
cufflinks 3.595       High
cufflinks 3.95       High
cufflinks 1.883        
cufflinks 3.426        
cufflinks 12.174       High
cufflinks 1.466        
cufflinks 1.484        
cufflinks 1.702        
cufflinks 0.804       Low
cufflinks 0.676       Low
cufflinks 1.205        
cufflinks 0.182       Low
cufflinks 2.887        
cufflinks 1.124        

0 Strain