Gene : Sobic.010G176200 S. bicolor v3.1.1
Defline:  (1 of 1) PF07343 - Protein of unknown function (DUF1475) (DUF1475) Genomic Order:  1859
Name:  ? Sobic.010G176200 Secondary Identifier:  ? PAC:37911861
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G176200 0.5kb upstream 0.5kb upstream 8472   true Chr10: 51410000-51418471 Sorghum bicolor
Sobic.010G176200 0.5kb upstream 0.5kb upstream 500   false Chr10: 51410000-51410499 Sorghum bicolor
Sobic.010G176200 0.5kb downstream 0.5kb downstream 8472   true Chr10: 51410500-51418971 Sorghum bicolor
Sobic.010G176200 0.5kb downstream 0.5kb downstream 500   false Chr10: 51418472-51418971 Sorghum bicolor
Sobic.010G176200 1.0kb upstream 1.0kb upstream 8972   true Chr10: 51409500-51418471 Sorghum bicolor
Sobic.010G176200 1.0kb upstream 1.0kb upstream 1000   false Chr10: 51409500-51410499 Sorghum bicolor
Sobic.010G176200 1.0kb downstream 1.0kb downstream 8972   true Chr10: 51410500-51419471 Sorghum bicolor
Sobic.010G176200 1.0kb downstream 1.0kb downstream 1000   false Chr10: 51418472-51419471 Sorghum bicolor
Sobic.010G176200 2.0kb upstream 2.0kb upstream 9972   true Chr10: 51408500-51418471 Sorghum bicolor
Sobic.010G176200 2.0kb upstream 2.0kb upstream 2000   false Chr10: 51408500-51410499 Sorghum bicolor
Sobic.010G176200 2.0kb downstream 2.0kb downstream 9972   true Chr10: 51410500-51420471 Sorghum bicolor
Sobic.010G176200 2.0kb downstream 2.0kb downstream 2000   false Chr10: 51418472-51420471 Sorghum bicolor
Sobic.010G176200 5.0kb upstream 5.0kb upstream 12972   true Chr10: 51405500-51418471 Sorghum bicolor
Sobic.010G176200 5.0kb upstream 5.0kb upstream 5000   false Chr10: 51405500-51410499 Sorghum bicolor
Sobic.010G176200 5.0kb downstream 5.0kb downstream 12972   true Chr10: 51410500-51423471 Sorghum bicolor
Sobic.010G176200 5.0kb downstream 5.0kb downstream 5000   false Chr10: 51418472-51423471 Sorghum bicolor
Sobic.010G176200 10.0kb upstream 10.0kb upstream 17972   true Chr10: 51400500-51418471 Sorghum bicolor
Sobic.010G176200 10.0kb upstream 10.0kb upstream 10000   false Chr10: 51400500-51410499 Sorghum bicolor
Sobic.010G176200 10.0kb downstream 10.0kb downstream 17972   true Chr10: 51410500-51428471 Sorghum bicolor
Sobic.010G176200 10.0kb downstream 10.0kb downstream 10000   false Chr10: 51418472-51428471 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026258 5273 Angiosperm View MSA
122184506 5267 Panicoideae View MSA
124572941 5269 Grass View MSA
121296248 5274 Embryophyte View MSA
123334445 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.626        
cufflinks 10.281     High High
cufflinks 12.194     High High
cufflinks 10.705       High
cufflinks 1.032        
cufflinks 4.446        
cufflinks 5.696        
cufflinks 7.585       High
cufflinks 0.852        
cufflinks 1.477        
cufflinks 0.284       Low
cufflinks 0.436       Low
cufflinks 1.608        
cufflinks 0.303       Low
cufflinks 6.706        
cufflinks 15.77     High High
cufflinks 6.39        
cufflinks 6.777        
cufflinks 7.73       High
cufflinks 7.034       High
cufflinks 0.63        
cufflinks 0.372       Low
cufflinks 0.46        
cufflinks 0.35       Low
cufflinks 7.68       High
cufflinks 8.054     High High
cufflinks 0.29       Low
cufflinks 0.232       Low
cufflinks 6.25        
cufflinks 4.959        

0 Strain