Gene : Sobic.008G159701 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11649:SF64 - PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 1 Genomic Order:  1670
Name:  ? Sobic.008G159701 Secondary Identifier:  ? PAC:37928271
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G159701 0.5kb upstream 0.5kb upstream 9294   true Chr08: 59297925-59307218 Sorghum bicolor
Sobic.008G159701 0.5kb upstream 0.5kb upstream 500   false Chr08: 59297925-59298424 Sorghum bicolor
Sobic.008G159701 0.5kb downstream 0.5kb downstream 9294   true Chr08: 59298425-59307718 Sorghum bicolor
Sobic.008G159701 0.5kb downstream 0.5kb downstream 500   false Chr08: 59307219-59307718 Sorghum bicolor
Sobic.008G159701 1.0kb upstream 1.0kb upstream 9794   true Chr08: 59297425-59307218 Sorghum bicolor
Sobic.008G159701 1.0kb upstream 1.0kb upstream 1000   false Chr08: 59297425-59298424 Sorghum bicolor
Sobic.008G159701 1.0kb downstream 1.0kb downstream 9794   true Chr08: 59298425-59308218 Sorghum bicolor
Sobic.008G159701 1.0kb downstream 1.0kb downstream 1000   false Chr08: 59307219-59308218 Sorghum bicolor
Sobic.008G159701 2.0kb upstream 2.0kb upstream 10794   true Chr08: 59296425-59307218 Sorghum bicolor
Sobic.008G159701 2.0kb upstream 2.0kb upstream 2000   false Chr08: 59296425-59298424 Sorghum bicolor
Sobic.008G159701 2.0kb downstream 2.0kb downstream 10794   true Chr08: 59298425-59309218 Sorghum bicolor
Sobic.008G159701 2.0kb downstream 2.0kb downstream 2000   false Chr08: 59307219-59309218 Sorghum bicolor
Sobic.008G159701 5.0kb upstream 5.0kb upstream 13794   true Chr08: 59293425-59307218 Sorghum bicolor
Sobic.008G159701 5.0kb upstream 5.0kb upstream 5000   false Chr08: 59293425-59298424 Sorghum bicolor
Sobic.008G159701 5.0kb downstream 5.0kb downstream 13794   true Chr08: 59298425-59312218 Sorghum bicolor
Sobic.008G159701 5.0kb downstream 5.0kb downstream 5000   false Chr08: 59307219-59312218 Sorghum bicolor
Sobic.008G159701 10.0kb upstream 10.0kb upstream 18794   true Chr08: 59288425-59307218 Sorghum bicolor
Sobic.008G159701 10.0kb upstream 10.0kb upstream 10000   false Chr08: 59288425-59298424 Sorghum bicolor
Sobic.008G159701 10.0kb downstream 10.0kb downstream 18794   true Chr08: 59298425-59317218 Sorghum bicolor
Sobic.008G159701 10.0kb downstream 10.0kb downstream 10000   false Chr08: 59307219-59317218 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188945 5267 Panicoideae View MSA
124580491 5269 Grass View MSA
122048345 5273 Angiosperm View MSA
121345089 5274 Embryophyte View MSA
123427050 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.211        
cufflinks 0.069       Low
cufflinks 0.357        
cufflinks 0.339        
cufflinks 2.664       High
cufflinks 1.057        
cufflinks 0.35        
cufflinks 0.034     Low Low
cufflinks 2.109       High
cufflinks 1.887       High
cufflinks 0.27        
cufflinks 0.226        
cufflinks 1.418        
cufflinks 0.372        
cufflinks 5.361       High
cufflinks 0.23        
cufflinks 0.334        
cufflinks 0.366        
cufflinks 0.578        
cufflinks 0.323        
cufflinks 2.9       High
cufflinks 0.429        
cufflinks 0.263        
cufflinks 0.221        
cufflinks 0.119       Low
cufflinks 0.044       Low
cufflinks 0.725        
cufflinks 0.852        
cufflinks 0.189        
cufflinks 1.931       High

0 Strain