Gene : Sobic.008G165900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR24031//PTHR24031:SF296 - RNA HELICASE // SUBFAMILY NOT NAMED Genomic Order:  1734
Name:  ? Sobic.008G165900 Secondary Identifier:  ? PAC:37927491
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.008G165900 0.5kb upstream 0.5kb upstream 4835   true Chr08: 59936479-59941313 Sorghum bicolor
Sobic.008G165900 0.5kb upstream 0.5kb upstream 500   false Chr08: 59940814-59941313 Sorghum bicolor
Sobic.008G165900 0.5kb downstream 0.5kb downstream 4835   true Chr08: 59935979-59940813 Sorghum bicolor
Sobic.008G165900 0.5kb downstream 0.5kb downstream 500   false Chr08: 59935979-59936478 Sorghum bicolor
Sobic.008G165900 1.0kb upstream 1.0kb upstream 5335   true Chr08: 59936479-59941813 Sorghum bicolor
Sobic.008G165900 1.0kb upstream 1.0kb upstream 1000   false Chr08: 59940814-59941813 Sorghum bicolor
Sobic.008G165900 1.0kb downstream 1.0kb downstream 5335   true Chr08: 59935479-59940813 Sorghum bicolor
Sobic.008G165900 1.0kb downstream 1.0kb downstream 1000   false Chr08: 59935479-59936478 Sorghum bicolor
Sobic.008G165900 2.0kb upstream 2.0kb upstream 6335   true Chr08: 59936479-59942813 Sorghum bicolor
Sobic.008G165900 2.0kb upstream 2.0kb upstream 2000   false Chr08: 59940814-59942813 Sorghum bicolor
Sobic.008G165900 2.0kb downstream 2.0kb downstream 6335   true Chr08: 59934479-59940813 Sorghum bicolor
Sobic.008G165900 2.0kb downstream 2.0kb downstream 2000   false Chr08: 59934479-59936478 Sorghum bicolor
Sobic.008G165900 5.0kb upstream 5.0kb upstream 9335   true Chr08: 59936479-59945813 Sorghum bicolor
Sobic.008G165900 5.0kb upstream 5.0kb upstream 5000   false Chr08: 59940814-59945813 Sorghum bicolor
Sobic.008G165900 5.0kb downstream 5.0kb downstream 9335   true Chr08: 59931479-59940813 Sorghum bicolor
Sobic.008G165900 5.0kb downstream 5.0kb downstream 5000   false Chr08: 59931479-59936478 Sorghum bicolor
Sobic.008G165900 10.0kb upstream 10.0kb upstream 14335   true Chr08: 59936479-59950813 Sorghum bicolor
Sobic.008G165900 10.0kb upstream 10.0kb upstream 10000   false Chr08: 59940814-59950813 Sorghum bicolor
Sobic.008G165900 10.0kb downstream 10.0kb downstream 14335   true Chr08: 59926479-59940813 Sorghum bicolor
Sobic.008G165900 10.0kb downstream 10.0kb downstream 10000   false Chr08: 59926479-59936478 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179934 5267 Panicoideae View MSA
124583267 5269 Grass View MSA
122044594 5273 Angiosperm View MSA
121310318 5274 Embryophyte View MSA
123426449 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 94.31     High High
cufflinks 4.241       Low
cufflinks 5.52       Low
cufflinks 22.655     High  
cufflinks 27.325     High  
cufflinks 16.445     High  
cufflinks 15.423     High  
cufflinks 5.075       Low
cufflinks 40.4     High  
cufflinks 44.319     High High
cufflinks 27.753     High  
cufflinks 38.758     High  
cufflinks 18.843     High  
cufflinks 35.369     High  
cufflinks 17.452     High  
cufflinks 7.386       Low
cufflinks 18.741     High  
cufflinks 17.616     High  
cufflinks 4.563       Low
cufflinks 23.098     High  
cufflinks 47.315     High High
cufflinks 30.465     High  
cufflinks 39.261     High  
cufflinks 41.593     High  
cufflinks 5.935       Low
cufflinks 2.493       Low
cufflinks 22.758     High  
cufflinks 51.254     High High
cufflinks 12.878     High  
cufflinks 26.792     High  

0 Strain