Gene : Sobic.010G232900 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12323 - SR-RELATED CTD ASSOCIATED FACTOR 6 Genomic Order:  2455
Name:  ? Sobic.010G232900 Secondary Identifier:  ? PAC:37911730
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G232900 0.5kb upstream 0.5kb upstream 4162   true Chr10: 57576175-57580336 Sorghum bicolor
Sobic.010G232900 0.5kb upstream 0.5kb upstream 500   false Chr10: 57579837-57580336 Sorghum bicolor
Sobic.010G232900 0.5kb downstream 0.5kb downstream 4162   true Chr10: 57575675-57579836 Sorghum bicolor
Sobic.010G232900 0.5kb downstream 0.5kb downstream 500   false Chr10: 57575675-57576174 Sorghum bicolor
Sobic.010G232900 1.0kb upstream 1.0kb upstream 4662   true Chr10: 57576175-57580836 Sorghum bicolor
Sobic.010G232900 1.0kb upstream 1.0kb upstream 1000   false Chr10: 57579837-57580836 Sorghum bicolor
Sobic.010G232900 1.0kb downstream 1.0kb downstream 4662   true Chr10: 57575175-57579836 Sorghum bicolor
Sobic.010G232900 1.0kb downstream 1.0kb downstream 1000   false Chr10: 57575175-57576174 Sorghum bicolor
Sobic.010G232900 2.0kb upstream 2.0kb upstream 5662   true Chr10: 57576175-57581836 Sorghum bicolor
Sobic.010G232900 2.0kb upstream 2.0kb upstream 2000   false Chr10: 57579837-57581836 Sorghum bicolor
Sobic.010G232900 2.0kb downstream 2.0kb downstream 5662   true Chr10: 57574175-57579836 Sorghum bicolor
Sobic.010G232900 2.0kb downstream 2.0kb downstream 2000   false Chr10: 57574175-57576174 Sorghum bicolor
Sobic.010G232900 5.0kb upstream 5.0kb upstream 8662   true Chr10: 57576175-57584836 Sorghum bicolor
Sobic.010G232900 5.0kb upstream 5.0kb upstream 5000   false Chr10: 57579837-57584836 Sorghum bicolor
Sobic.010G232900 5.0kb downstream 5.0kb downstream 8662   true Chr10: 57571175-57579836 Sorghum bicolor
Sobic.010G232900 5.0kb downstream 5.0kb downstream 5000   false Chr10: 57571175-57576174 Sorghum bicolor
Sobic.010G232900 10.0kb upstream 10.0kb upstream 13662   true Chr10: 57576175-57589836 Sorghum bicolor
Sobic.010G232900 10.0kb upstream 10.0kb upstream 10000   false Chr10: 57579837-57589836 Sorghum bicolor
Sobic.010G232900 10.0kb downstream 10.0kb downstream 13662   true Chr10: 57566175-57579836 Sorghum bicolor
Sobic.010G232900 10.0kb downstream 10.0kb downstream 10000   false Chr10: 57566175-57576174 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187764 5267 Panicoideae View MSA
124573167 5269 Grass View MSA
122044059 5273 Angiosperm View MSA
121346189 5274 Embryophyte View MSA
123424893 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.366     High High
cufflinks 1.276       Low
cufflinks 1.6       Low
cufflinks 2.077       Low
cufflinks 3.939        
cufflinks 4.728        
cufflinks 3.611        
cufflinks 1.705       Low
cufflinks 5.706        
cufflinks 5.486        
cufflinks 4.225        
cufflinks 5.088        
cufflinks 4.1        
cufflinks 5.379        
cufflinks 3.722        
cufflinks 2.942        
cufflinks 3.755        
cufflinks 3.603        
cufflinks 4.986        
cufflinks 3.508        
cufflinks 7.679       High
cufflinks 5.695        
cufflinks 5.268        
cufflinks 6.324        
cufflinks 1.941       Low
cufflinks 1.109       Low
cufflinks 2.715        
cufflinks 11.751     High High
cufflinks 2.724        
cufflinks 4.611        

0 Strain