Gene : Sobic.010G226000 S. bicolor v3.1.1
Defline:  (1 of 4) PF16709 - Fused Ig-PH domain of plant-specific actin-binding protein (SCAB-IgPH) Genomic Order:  2382
Name:  ? Sobic.010G226000 Secondary Identifier:  ? PAC:37909802
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G226000 0.5kb upstream 0.5kb upstream 8592   true Chr10: 56893011-56901602 Sorghum bicolor
Sobic.010G226000 0.5kb upstream 0.5kb upstream 500   false Chr10: 56893011-56893510 Sorghum bicolor
Sobic.010G226000 0.5kb downstream 0.5kb downstream 8592   true Chr10: 56893511-56902102 Sorghum bicolor
Sobic.010G226000 0.5kb downstream 0.5kb downstream 500   false Chr10: 56901603-56902102 Sorghum bicolor
Sobic.010G226000 1.0kb upstream 1.0kb upstream 9092   true Chr10: 56892511-56901602 Sorghum bicolor
Sobic.010G226000 1.0kb upstream 1.0kb upstream 1000   false Chr10: 56892511-56893510 Sorghum bicolor
Sobic.010G226000 1.0kb downstream 1.0kb downstream 9092   true Chr10: 56893511-56902602 Sorghum bicolor
Sobic.010G226000 1.0kb downstream 1.0kb downstream 1000   false Chr10: 56901603-56902602 Sorghum bicolor
Sobic.010G226000 2.0kb upstream 2.0kb upstream 10092   true Chr10: 56891511-56901602 Sorghum bicolor
Sobic.010G226000 2.0kb upstream 2.0kb upstream 2000   false Chr10: 56891511-56893510 Sorghum bicolor
Sobic.010G226000 2.0kb downstream 2.0kb downstream 10092   true Chr10: 56893511-56903602 Sorghum bicolor
Sobic.010G226000 2.0kb downstream 2.0kb downstream 2000   false Chr10: 56901603-56903602 Sorghum bicolor
Sobic.010G226000 5.0kb upstream 5.0kb upstream 13092   true Chr10: 56888511-56901602 Sorghum bicolor
Sobic.010G226000 5.0kb upstream 5.0kb upstream 5000   false Chr10: 56888511-56893510 Sorghum bicolor
Sobic.010G226000 5.0kb downstream 5.0kb downstream 13092   true Chr10: 56893511-56906602 Sorghum bicolor
Sobic.010G226000 5.0kb downstream 5.0kb downstream 5000   false Chr10: 56901603-56906602 Sorghum bicolor
Sobic.010G226000 10.0kb upstream 10.0kb upstream 18092   true Chr10: 56883511-56901602 Sorghum bicolor
Sobic.010G226000 10.0kb upstream 10.0kb upstream 10000   false Chr10: 56883511-56893510 Sorghum bicolor
Sobic.010G226000 10.0kb downstream 10.0kb downstream 18092   true Chr10: 56893511-56911602 Sorghum bicolor
Sobic.010G226000 10.0kb downstream 10.0kb downstream 10000   false Chr10: 56901603-56911602 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182648 5267 Panicoideae View MSA
124579194 5269 Grass View MSA
122044281 5273 Angiosperm View MSA
121310265 5274 Embryophyte View MSA
123347803 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.972       Low
cufflinks 4.99        
cufflinks 11.23     High High
cufflinks 10.198       High
cufflinks 6.104        
cufflinks 7.018        
cufflinks 3.842        
cufflinks 4.031        
cufflinks 8.889       High
cufflinks 9.808       High
cufflinks 4.247        
cufflinks 4.575        
cufflinks 8.927       High
cufflinks 3.317       Low
cufflinks 7.114        
cufflinks 6.403        
cufflinks 4.134        
cufflinks 4.227        
cufflinks 6.56        
cufflinks 5.422        
cufflinks 6.172        
cufflinks 3.788        
cufflinks 3.761        
cufflinks 3.301       Low
cufflinks 7.22        
cufflinks 4.388        
cufflinks 6.374        
cufflinks 2.615       Low
cufflinks 4.151        
cufflinks 6.822        

0 Strain