Gene : Sobic.010G223400 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR21443 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 Genomic Order:  2349
Name:  ? Sobic.010G223400 Secondary Identifier:  ? PAC:37912137
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G223400 0.5kb upstream 0.5kb upstream 5694   true Chr10: 56532298-56537991 Sorghum bicolor
Sobic.010G223400 0.5kb upstream 0.5kb upstream 500   false Chr10: 56537492-56537991 Sorghum bicolor
Sobic.010G223400 0.5kb downstream 0.5kb downstream 5694   true Chr10: 56531798-56537491 Sorghum bicolor
Sobic.010G223400 0.5kb downstream 0.5kb downstream 500   false Chr10: 56531798-56532297 Sorghum bicolor
Sobic.010G223400 1.0kb upstream 1.0kb upstream 6194   true Chr10: 56532298-56538491 Sorghum bicolor
Sobic.010G223400 1.0kb upstream 1.0kb upstream 1000   false Chr10: 56537492-56538491 Sorghum bicolor
Sobic.010G223400 1.0kb downstream 1.0kb downstream 6194   true Chr10: 56531298-56537491 Sorghum bicolor
Sobic.010G223400 1.0kb downstream 1.0kb downstream 1000   false Chr10: 56531298-56532297 Sorghum bicolor
Sobic.010G223400 2.0kb upstream 2.0kb upstream 7194   true Chr10: 56532298-56539491 Sorghum bicolor
Sobic.010G223400 2.0kb upstream 2.0kb upstream 2000   false Chr10: 56537492-56539491 Sorghum bicolor
Sobic.010G223400 2.0kb downstream 2.0kb downstream 7194   true Chr10: 56530298-56537491 Sorghum bicolor
Sobic.010G223400 2.0kb downstream 2.0kb downstream 2000   false Chr10: 56530298-56532297 Sorghum bicolor
Sobic.010G223400 5.0kb upstream 5.0kb upstream 10194   true Chr10: 56532298-56542491 Sorghum bicolor
Sobic.010G223400 5.0kb upstream 5.0kb upstream 5000   false Chr10: 56537492-56542491 Sorghum bicolor
Sobic.010G223400 5.0kb downstream 5.0kb downstream 10194   true Chr10: 56527298-56537491 Sorghum bicolor
Sobic.010G223400 5.0kb downstream 5.0kb downstream 5000   false Chr10: 56527298-56532297 Sorghum bicolor
Sobic.010G223400 10.0kb upstream 10.0kb upstream 15194   true Chr10: 56532298-56547491 Sorghum bicolor
Sobic.010G223400 10.0kb upstream 10.0kb upstream 10000   false Chr10: 56537492-56547491 Sorghum bicolor
Sobic.010G223400 10.0kb downstream 10.0kb downstream 15194   true Chr10: 56522298-56537491 Sorghum bicolor
Sobic.010G223400 10.0kb downstream 10.0kb downstream 10000   false Chr10: 56522298-56532297 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187602 5267 Panicoideae View MSA
124577502 5269 Grass View MSA
122041603 5273 Angiosperm View MSA
121347669 5274 Embryophyte View MSA
123424690 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.618     High  
cufflinks 2.281       Low
cufflinks 5.971       Low
cufflinks 7.031        
cufflinks 20.265     High  
cufflinks 5.279       Low
cufflinks 14.816     High  
cufflinks 4.785       Low
cufflinks 18.053     High  
cufflinks 16.554     High  
cufflinks 14.35     High  
cufflinks 17.143     High  
cufflinks 17.466     High  
cufflinks 16.561     High  
cufflinks 14.119     High  
cufflinks 5.796       Low
cufflinks 15.577     High  
cufflinks 15.222     High  
cufflinks 4.987       Low
cufflinks 18.408     High  
cufflinks 21.041     High  
cufflinks 20.7     High  
cufflinks 18.718     High  
cufflinks 20.073     High  
cufflinks 5.597       Low
cufflinks 2.369       Low
cufflinks 13.064     High  
cufflinks 10.498     High  
cufflinks 12.777     High  
cufflinks 15.461     High  

0 Strain