Gene : Sobic.010G223300 S. bicolor v3.1.1
Defline:  (1 of 2) K00999 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase (CDIPT) Genomic Order:  2348
Name:  ? Sobic.010G223300 Secondary Identifier:  ? PAC:37911703
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-6351 Sorghum bicolor pathologic  
Sbicolor PWY-6352 Sorghum bicolor pathologic  
Sbicolor PWY-7625 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G223300 0.5kb upstream 0.5kb upstream 4247   true Chr10: 56524446-56528692 Sorghum bicolor
Sobic.010G223300 0.5kb upstream 0.5kb upstream 500   false Chr10: 56528193-56528692 Sorghum bicolor
Sobic.010G223300 0.5kb downstream 0.5kb downstream 4247   true Chr10: 56523946-56528192 Sorghum bicolor
Sobic.010G223300 0.5kb downstream 0.5kb downstream 500   false Chr10: 56523946-56524445 Sorghum bicolor
Sobic.010G223300 1.0kb upstream 1.0kb upstream 4747   true Chr10: 56524446-56529192 Sorghum bicolor
Sobic.010G223300 1.0kb upstream 1.0kb upstream 1000   false Chr10: 56528193-56529192 Sorghum bicolor
Sobic.010G223300 1.0kb downstream 1.0kb downstream 4747   true Chr10: 56523446-56528192 Sorghum bicolor
Sobic.010G223300 1.0kb downstream 1.0kb downstream 1000   false Chr10: 56523446-56524445 Sorghum bicolor
Sobic.010G223300 2.0kb upstream 2.0kb upstream 5747   true Chr10: 56524446-56530192 Sorghum bicolor
Sobic.010G223300 2.0kb upstream 2.0kb upstream 2000   false Chr10: 56528193-56530192 Sorghum bicolor
Sobic.010G223300 2.0kb downstream 2.0kb downstream 5747   true Chr10: 56522446-56528192 Sorghum bicolor
Sobic.010G223300 2.0kb downstream 2.0kb downstream 2000   false Chr10: 56522446-56524445 Sorghum bicolor
Sobic.010G223300 5.0kb upstream 5.0kb upstream 8747   true Chr10: 56524446-56533192 Sorghum bicolor
Sobic.010G223300 5.0kb upstream 5.0kb upstream 5000   false Chr10: 56528193-56533192 Sorghum bicolor
Sobic.010G223300 5.0kb downstream 5.0kb downstream 8747   true Chr10: 56519446-56528192 Sorghum bicolor
Sobic.010G223300 5.0kb downstream 5.0kb downstream 5000   false Chr10: 56519446-56524445 Sorghum bicolor
Sobic.010G223300 10.0kb upstream 10.0kb upstream 13747   true Chr10: 56524446-56538192 Sorghum bicolor
Sobic.010G223300 10.0kb upstream 10.0kb upstream 10000   false Chr10: 56528193-56538192 Sorghum bicolor
Sobic.010G223300 10.0kb downstream 10.0kb downstream 13747   true Chr10: 56514446-56528192 Sorghum bicolor
Sobic.010G223300 10.0kb downstream 10.0kb downstream 10000   false Chr10: 56514446-56524445 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182326 5267 Panicoideae View MSA
124584477 5269 Grass View MSA
122046136 5273 Angiosperm View MSA
121345622 5274 Embryophyte View MSA
123428790 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.508     High  
cufflinks 3.209       Low
cufflinks 8.072        
cufflinks 13.176     High  
cufflinks 10.977        
cufflinks 13.467        
cufflinks 8.127        
cufflinks 4.554       Low
cufflinks 15.471     High High
cufflinks 15.15     High  
cufflinks 10.585        
cufflinks 12.006     High  
cufflinks 12.51     High  
cufflinks 12.118     High  
cufflinks 12.49     High  
cufflinks 8.086        
cufflinks 8.375        
cufflinks 8.318        
cufflinks 5.787       Low
cufflinks 11.19        
cufflinks 9.88        
cufflinks 16.143     High High
cufflinks 11.495     High  
cufflinks 11.733     High  
cufflinks 5.867       Low
cufflinks 2.818       Low
cufflinks 11.796     High  
cufflinks 4.078       Low
cufflinks 9.719        
cufflinks 11.515        

0 Strain