Gene : Sobic.010G221200 S. bicolor v3.1.1
Defline:  (1 of 2) PTHR13109 - NEUROCHONDRIN Genomic Order:  2326
Name:  ? Sobic.010G221200 Secondary Identifier:  ? PAC:37908781
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G221200 0.5kb upstream 0.5kb upstream 2629   true Chr10: 56379636-56382264 Sorghum bicolor
Sobic.010G221200 0.5kb upstream 0.5kb upstream 500   false Chr10: 56381765-56382264 Sorghum bicolor
Sobic.010G221200 0.5kb downstream 0.5kb downstream 2629   true Chr10: 56379136-56381764 Sorghum bicolor
Sobic.010G221200 0.5kb downstream 0.5kb downstream 500   false Chr10: 56379136-56379635 Sorghum bicolor
Sobic.010G221200 1.0kb upstream 1.0kb upstream 3129   true Chr10: 56379636-56382764 Sorghum bicolor
Sobic.010G221200 1.0kb upstream 1.0kb upstream 1000   false Chr10: 56381765-56382764 Sorghum bicolor
Sobic.010G221200 1.0kb downstream 1.0kb downstream 3129   true Chr10: 56378636-56381764 Sorghum bicolor
Sobic.010G221200 1.0kb downstream 1.0kb downstream 1000   false Chr10: 56378636-56379635 Sorghum bicolor
Sobic.010G221200 2.0kb upstream 2.0kb upstream 4129   true Chr10: 56379636-56383764 Sorghum bicolor
Sobic.010G221200 2.0kb upstream 2.0kb upstream 2000   false Chr10: 56381765-56383764 Sorghum bicolor
Sobic.010G221200 2.0kb downstream 2.0kb downstream 4129   true Chr10: 56377636-56381764 Sorghum bicolor
Sobic.010G221200 2.0kb downstream 2.0kb downstream 2000   false Chr10: 56377636-56379635 Sorghum bicolor
Sobic.010G221200 5.0kb upstream 5.0kb upstream 7129   true Chr10: 56379636-56386764 Sorghum bicolor
Sobic.010G221200 5.0kb upstream 5.0kb upstream 5000   false Chr10: 56381765-56386764 Sorghum bicolor
Sobic.010G221200 5.0kb downstream 5.0kb downstream 7129   true Chr10: 56374636-56381764 Sorghum bicolor
Sobic.010G221200 5.0kb downstream 5.0kb downstream 5000   false Chr10: 56374636-56379635 Sorghum bicolor
Sobic.010G221200 10.0kb upstream 10.0kb upstream 12129   true Chr10: 56379636-56391764 Sorghum bicolor
Sobic.010G221200 10.0kb upstream 10.0kb upstream 10000   false Chr10: 56381765-56391764 Sorghum bicolor
Sobic.010G221200 10.0kb downstream 10.0kb downstream 12129   true Chr10: 56369636-56381764 Sorghum bicolor
Sobic.010G221200 10.0kb downstream 10.0kb downstream 10000   false Chr10: 56369636-56379635 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189030 5267 Panicoideae View MSA
124584444 5269 Grass View MSA
122047027 5273 Angiosperm View MSA
121345052 5274 Embryophyte View MSA
123426950 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.034        
cufflinks 1.376       Low
cufflinks 3.164       Low
cufflinks 5.363        
cufflinks 8.11        
cufflinks 4.84        
cufflinks 4.564        
cufflinks 3.547        
cufflinks 11.49       High
cufflinks 11.45       High
cufflinks 4.974        
cufflinks 8.12        
cufflinks 8.655        
cufflinks 7.009        
cufflinks 5.734        
cufflinks 2.282       Low
cufflinks 4.164        
cufflinks 5.359        
cufflinks 3.85        
cufflinks 6.067        
cufflinks 12.807       High
cufflinks 7.017        
cufflinks 7.235        
cufflinks 7.697        
cufflinks 3.464        
cufflinks 2.003       Low
cufflinks 6.886        
cufflinks 10.126     High High
cufflinks 5.341        
cufflinks 9.05        

0 Strain