Gene : Sobic.010G220600 S. bicolor v3.1.1
Defline:  (1 of 5) K17686 - Cu+-exporting ATPase (copA, ATP7) Genomic Order:  2319
Name:  ? Sobic.010G220600 Secondary Identifier:  ? PAC:37910910
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G220600 0.5kb upstream 0.5kb upstream 7076   true Chr10: 56275646-56282721 Sorghum bicolor
Sobic.010G220600 0.5kb upstream 0.5kb upstream 500   false Chr10: 56282222-56282721 Sorghum bicolor
Sobic.010G220600 0.5kb downstream 0.5kb downstream 7076   true Chr10: 56275146-56282221 Sorghum bicolor
Sobic.010G220600 0.5kb downstream 0.5kb downstream 500   false Chr10: 56275146-56275645 Sorghum bicolor
Sobic.010G220600 1.0kb upstream 1.0kb upstream 7576   true Chr10: 56275646-56283221 Sorghum bicolor
Sobic.010G220600 1.0kb upstream 1.0kb upstream 1000   false Chr10: 56282222-56283221 Sorghum bicolor
Sobic.010G220600 1.0kb downstream 1.0kb downstream 7576   true Chr10: 56274646-56282221 Sorghum bicolor
Sobic.010G220600 1.0kb downstream 1.0kb downstream 1000   false Chr10: 56274646-56275645 Sorghum bicolor
Sobic.010G220600 2.0kb upstream 2.0kb upstream 8576   true Chr10: 56275646-56284221 Sorghum bicolor
Sobic.010G220600 2.0kb upstream 2.0kb upstream 2000   false Chr10: 56282222-56284221 Sorghum bicolor
Sobic.010G220600 2.0kb downstream 2.0kb downstream 8576   true Chr10: 56273646-56282221 Sorghum bicolor
Sobic.010G220600 2.0kb downstream 2.0kb downstream 2000   false Chr10: 56273646-56275645 Sorghum bicolor
Sobic.010G220600 5.0kb upstream 5.0kb upstream 11576   true Chr10: 56275646-56287221 Sorghum bicolor
Sobic.010G220600 5.0kb upstream 5.0kb upstream 5000   false Chr10: 56282222-56287221 Sorghum bicolor
Sobic.010G220600 5.0kb downstream 5.0kb downstream 11576   true Chr10: 56270646-56282221 Sorghum bicolor
Sobic.010G220600 5.0kb downstream 5.0kb downstream 5000   false Chr10: 56270646-56275645 Sorghum bicolor
Sobic.010G220600 10.0kb upstream 10.0kb upstream 16576   true Chr10: 56275646-56292221 Sorghum bicolor
Sobic.010G220600 10.0kb upstream 10.0kb upstream 10000   false Chr10: 56282222-56292221 Sorghum bicolor
Sobic.010G220600 10.0kb downstream 10.0kb downstream 16576   true Chr10: 56265646-56282221 Sorghum bicolor
Sobic.010G220600 10.0kb downstream 10.0kb downstream 10000   false Chr10: 56265646-56275645 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179651 5267 Panicoideae View MSA
124582889 5269 Grass View MSA
122045942 5273 Angiosperm View MSA
121346195 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.521       Low
cufflinks 1.276       Low
cufflinks 4.227        
cufflinks 6.345        
cufflinks 19.803     High  
cufflinks 5.524        
cufflinks 8.658        
cufflinks 6.311        
cufflinks 13.592     High  
cufflinks 20.439     High  
cufflinks 31.92     High High
cufflinks 30.015     High High
cufflinks 56.945     High High
cufflinks 33.82     High High
cufflinks 10.29        
cufflinks 1.499       Low
cufflinks 9.292        
cufflinks 9.031        
cufflinks 4.504        
cufflinks 9.79        
cufflinks 2.135       Low
cufflinks 18.424     High  
cufflinks 23.488     High  
cufflinks 22.485     High  
cufflinks 1.754       Low
cufflinks 1.433       Low
cufflinks 22.483     High  
cufflinks 1.728       Low
cufflinks 21.735     High  
cufflinks 7.503        

0 Strain