Gene : Sobic.010G206900 S. bicolor v3.1.1
Defline:  (1 of 1) K03125 - transcription initiation factor TFIID subunit 1 (TAF1) Genomic Order:  2178
Name:  ? Sobic.010G206900 Secondary Identifier:  ? PAC:37909507
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G206900 0.5kb upstream 0.5kb upstream 17919   true Chr10: 54970059-54987977 Sorghum bicolor
Sobic.010G206900 0.5kb upstream 0.5kb upstream 500   false Chr10: 54987478-54987977 Sorghum bicolor
Sobic.010G206900 0.5kb downstream 0.5kb downstream 17919   true Chr10: 54969559-54987477 Sorghum bicolor
Sobic.010G206900 0.5kb downstream 0.5kb downstream 500   false Chr10: 54969559-54970058 Sorghum bicolor
Sobic.010G206900 1.0kb upstream 1.0kb upstream 18419   true Chr10: 54970059-54988477 Sorghum bicolor
Sobic.010G206900 1.0kb upstream 1.0kb upstream 1000   false Chr10: 54987478-54988477 Sorghum bicolor
Sobic.010G206900 1.0kb downstream 1.0kb downstream 18419   true Chr10: 54969059-54987477 Sorghum bicolor
Sobic.010G206900 1.0kb downstream 1.0kb downstream 1000   false Chr10: 54969059-54970058 Sorghum bicolor
Sobic.010G206900 2.0kb upstream 2.0kb upstream 19419   true Chr10: 54970059-54989477 Sorghum bicolor
Sobic.010G206900 2.0kb upstream 2.0kb upstream 2000   false Chr10: 54987478-54989477 Sorghum bicolor
Sobic.010G206900 2.0kb downstream 2.0kb downstream 19419   true Chr10: 54968059-54987477 Sorghum bicolor
Sobic.010G206900 2.0kb downstream 2.0kb downstream 2000   false Chr10: 54968059-54970058 Sorghum bicolor
Sobic.010G206900 5.0kb upstream 5.0kb upstream 22419   true Chr10: 54970059-54992477 Sorghum bicolor
Sobic.010G206900 5.0kb upstream 5.0kb upstream 5000   false Chr10: 54987478-54992477 Sorghum bicolor
Sobic.010G206900 5.0kb downstream 5.0kb downstream 22419   true Chr10: 54965059-54987477 Sorghum bicolor
Sobic.010G206900 5.0kb downstream 5.0kb downstream 5000   false Chr10: 54965059-54970058 Sorghum bicolor
Sobic.010G206900 10.0kb upstream 10.0kb upstream 27419   true Chr10: 54970059-54997477 Sorghum bicolor
Sobic.010G206900 10.0kb upstream 10.0kb upstream 10000   false Chr10: 54987478-54997477 Sorghum bicolor
Sobic.010G206900 10.0kb downstream 10.0kb downstream 27419   true Chr10: 54960059-54987477 Sorghum bicolor
Sobic.010G206900 10.0kb downstream 10.0kb downstream 10000   false Chr10: 54960059-54970058 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180207 5267 Panicoideae View MSA
124574447 5269 Grass View MSA
122046359 5273 Angiosperm View MSA
121347140 5274 Embryophyte View MSA
123423919 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.598       Low
cufflinks 4.684        
cufflinks 6.109        
cufflinks 5.022        
cufflinks 8.637       High
cufflinks 5.999        
cufflinks 6.056        
cufflinks 4.357        
cufflinks 8.048        
cufflinks 6.275        
cufflinks 6.91        
cufflinks 8.287       High
cufflinks 6.011        
cufflinks 5.791        
cufflinks 8.781       High
cufflinks 5.246        
cufflinks 5.39        
cufflinks 5.554        
cufflinks 7.363        
cufflinks 6.481        
cufflinks 12.286       High
cufflinks 5.424        
cufflinks 6.229        
cufflinks 5.79        
cufflinks 7.125        
cufflinks 5.479        
cufflinks 6.414        
cufflinks 3.098       Low
cufflinks 4.408        
cufflinks 9.357       High

0 Strain