Gene : Sobic.010G205300 S. bicolor v3.1.1
Defline:  (1 of 1) KOG3306 - Predicted membrane protein Genomic Order:  2162
Name:  ? Sobic.010G205300 Secondary Identifier:  ? PAC:37908955
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G205300 0.5kb upstream 0.5kb upstream 3879   true Chr10: 54809290-54813168 Sorghum bicolor
Sobic.010G205300 0.5kb upstream 0.5kb upstream 500   false Chr10: 54809290-54809789 Sorghum bicolor
Sobic.010G205300 0.5kb downstream 0.5kb downstream 3879   true Chr10: 54809790-54813668 Sorghum bicolor
Sobic.010G205300 0.5kb downstream 0.5kb downstream 500   false Chr10: 54813169-54813668 Sorghum bicolor
Sobic.010G205300 1.0kb upstream 1.0kb upstream 4379   true Chr10: 54808790-54813168 Sorghum bicolor
Sobic.010G205300 1.0kb upstream 1.0kb upstream 1000   false Chr10: 54808790-54809789 Sorghum bicolor
Sobic.010G205300 1.0kb downstream 1.0kb downstream 4379   true Chr10: 54809790-54814168 Sorghum bicolor
Sobic.010G205300 1.0kb downstream 1.0kb downstream 1000   false Chr10: 54813169-54814168 Sorghum bicolor
Sobic.010G205300 2.0kb upstream 2.0kb upstream 5379   true Chr10: 54807790-54813168 Sorghum bicolor
Sobic.010G205300 2.0kb upstream 2.0kb upstream 2000   false Chr10: 54807790-54809789 Sorghum bicolor
Sobic.010G205300 2.0kb downstream 2.0kb downstream 5379   true Chr10: 54809790-54815168 Sorghum bicolor
Sobic.010G205300 2.0kb downstream 2.0kb downstream 2000   false Chr10: 54813169-54815168 Sorghum bicolor
Sobic.010G205300 5.0kb upstream 5.0kb upstream 8379   true Chr10: 54804790-54813168 Sorghum bicolor
Sobic.010G205300 5.0kb upstream 5.0kb upstream 5000   false Chr10: 54804790-54809789 Sorghum bicolor
Sobic.010G205300 5.0kb downstream 5.0kb downstream 8379   true Chr10: 54809790-54818168 Sorghum bicolor
Sobic.010G205300 5.0kb downstream 5.0kb downstream 5000   false Chr10: 54813169-54818168 Sorghum bicolor
Sobic.010G205300 10.0kb upstream 10.0kb upstream 13379   true Chr10: 54799790-54813168 Sorghum bicolor
Sobic.010G205300 10.0kb upstream 10.0kb upstream 10000   false Chr10: 54799790-54809789 Sorghum bicolor
Sobic.010G205300 10.0kb downstream 10.0kb downstream 13379   true Chr10: 54809790-54823168 Sorghum bicolor
Sobic.010G205300 10.0kb downstream 10.0kb downstream 10000   false Chr10: 54813169-54823168 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181946 5267 Panicoideae View MSA
124570092 5269 Grass View MSA
122047015 5273 Angiosperm View MSA
121345754 5274 Embryophyte View MSA
123424414 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.927     High High
cufflinks 10.691     High Low
cufflinks 21.241     High  
cufflinks 35.378     High High
cufflinks 16.333     High  
cufflinks 24.649     High  
cufflinks 22.641     High  
cufflinks 11.709     High Low
cufflinks 26.829     High  
cufflinks 25.128     High  
cufflinks 22.523     High  
cufflinks 28.642     High  
cufflinks 27.818     High  
cufflinks 31.575     High  
cufflinks 29.753     High  
cufflinks 24.895     High  
cufflinks 27.018     High  
cufflinks 28.293     High  
cufflinks 13.372     High Low
cufflinks 36.939     High High
cufflinks 13.715       Low
cufflinks 35.827     High High
cufflinks 34.756     High High
cufflinks 29.727     High  
cufflinks 15.263     High Low
cufflinks 8.244     High Low
cufflinks 22.561     High  
cufflinks 25.89     High  
cufflinks 18.864     High  
cufflinks 30.512     High  

0 Strain