Gene : Sobic.010G204300 S. bicolor v3.1.1
Defline:  (1 of 7) PF02845 - CUE domain (CUE) Genomic Order:  2153
Name:  ? Sobic.010G204300 Secondary Identifier:  ? PAC:37910486
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G204300 0.5kb upstream 0.5kb upstream 3478   true Chr10: 54660213-54663690 Sorghum bicolor
Sobic.010G204300 0.5kb upstream 0.5kb upstream 500   false Chr10: 54663191-54663690 Sorghum bicolor
Sobic.010G204300 0.5kb downstream 0.5kb downstream 3478   true Chr10: 54659713-54663190 Sorghum bicolor
Sobic.010G204300 0.5kb downstream 0.5kb downstream 500   false Chr10: 54659713-54660212 Sorghum bicolor
Sobic.010G204300 1.0kb upstream 1.0kb upstream 3978   true Chr10: 54660213-54664190 Sorghum bicolor
Sobic.010G204300 1.0kb upstream 1.0kb upstream 1000   false Chr10: 54663191-54664190 Sorghum bicolor
Sobic.010G204300 1.0kb downstream 1.0kb downstream 3978   true Chr10: 54659213-54663190 Sorghum bicolor
Sobic.010G204300 1.0kb downstream 1.0kb downstream 1000   false Chr10: 54659213-54660212 Sorghum bicolor
Sobic.010G204300 2.0kb upstream 2.0kb upstream 4978   true Chr10: 54660213-54665190 Sorghum bicolor
Sobic.010G204300 2.0kb upstream 2.0kb upstream 2000   false Chr10: 54663191-54665190 Sorghum bicolor
Sobic.010G204300 2.0kb downstream 2.0kb downstream 4978   true Chr10: 54658213-54663190 Sorghum bicolor
Sobic.010G204300 2.0kb downstream 2.0kb downstream 2000   false Chr10: 54658213-54660212 Sorghum bicolor
Sobic.010G204300 5.0kb upstream 5.0kb upstream 7978   true Chr10: 54660213-54668190 Sorghum bicolor
Sobic.010G204300 5.0kb upstream 5.0kb upstream 5000   false Chr10: 54663191-54668190 Sorghum bicolor
Sobic.010G204300 5.0kb downstream 5.0kb downstream 7978   true Chr10: 54655213-54663190 Sorghum bicolor
Sobic.010G204300 5.0kb downstream 5.0kb downstream 5000   false Chr10: 54655213-54660212 Sorghum bicolor
Sobic.010G204300 10.0kb upstream 10.0kb upstream 12978   true Chr10: 54660213-54673190 Sorghum bicolor
Sobic.010G204300 10.0kb upstream 10.0kb upstream 10000   false Chr10: 54663191-54673190 Sorghum bicolor
Sobic.010G204300 10.0kb downstream 10.0kb downstream 12978   true Chr10: 54650213-54663190 Sorghum bicolor
Sobic.010G204300 10.0kb downstream 10.0kb downstream 10000   false Chr10: 54650213-54660212 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188696 5267 Panicoideae View MSA
124577672 5269 Grass View MSA
122042927 5273 Angiosperm View MSA
121343800 5274 Embryophyte View MSA
123427997 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 114.548     High High
cufflinks 40.048     High  
cufflinks 124.29     High High
cufflinks 186.844     High High
cufflinks 47.807     High  
cufflinks 116.676     High High
cufflinks 24.104     High Low
cufflinks 18.619     High Low
cufflinks 69.252     High  
cufflinks 70.005     High  
cufflinks 55.612     High  
cufflinks 42.962     High  
cufflinks 71.34     High  
cufflinks 44.117     High  
cufflinks 87.809     High  
cufflinks 50.091     High  
cufflinks 25.266     High Low
cufflinks 25.914     High Low
cufflinks 54.091     High  
cufflinks 29.701     High  
cufflinks 29.408     High  
cufflinks 37.806     High  
cufflinks 39.338     High  
cufflinks 37.449     High  
cufflinks 27.731     High Low
cufflinks 18.434     High Low
cufflinks 116.143     High High
cufflinks 89.914     High  
cufflinks 22.05     High Low
cufflinks 82.819     High  

0 Strain