Gene : Sobic.010G258000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11071//PTHR11071:SF291 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // SUBFAMILY NOT NAMED Genomic Order:  2715
Name:  ? Sobic.010G258000 Secondary Identifier:  ? PAC:37912106
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G258000 0.5kb upstream 0.5kb upstream 2740   true Chr10: 59562391-59565130 Sorghum bicolor
Sobic.010G258000 0.5kb upstream 0.5kb upstream 500   false Chr10: 59562391-59562890 Sorghum bicolor
Sobic.010G258000 0.5kb downstream 0.5kb downstream 2740   true Chr10: 59562891-59565630 Sorghum bicolor
Sobic.010G258000 0.5kb downstream 0.5kb downstream 500   false Chr10: 59565131-59565630 Sorghum bicolor
Sobic.010G258000 1.0kb upstream 1.0kb upstream 3240   true Chr10: 59561891-59565130 Sorghum bicolor
Sobic.010G258000 1.0kb upstream 1.0kb upstream 1000   false Chr10: 59561891-59562890 Sorghum bicolor
Sobic.010G258000 1.0kb downstream 1.0kb downstream 3240   true Chr10: 59562891-59566130 Sorghum bicolor
Sobic.010G258000 1.0kb downstream 1.0kb downstream 1000   false Chr10: 59565131-59566130 Sorghum bicolor
Sobic.010G258000 2.0kb upstream 2.0kb upstream 4240   true Chr10: 59560891-59565130 Sorghum bicolor
Sobic.010G258000 2.0kb upstream 2.0kb upstream 2000   false Chr10: 59560891-59562890 Sorghum bicolor
Sobic.010G258000 2.0kb downstream 2.0kb downstream 4240   true Chr10: 59562891-59567130 Sorghum bicolor
Sobic.010G258000 2.0kb downstream 2.0kb downstream 2000   false Chr10: 59565131-59567130 Sorghum bicolor
Sobic.010G258000 5.0kb upstream 5.0kb upstream 7240   true Chr10: 59557891-59565130 Sorghum bicolor
Sobic.010G258000 5.0kb upstream 5.0kb upstream 5000   false Chr10: 59557891-59562890 Sorghum bicolor
Sobic.010G258000 5.0kb downstream 5.0kb downstream 7240   true Chr10: 59562891-59570130 Sorghum bicolor
Sobic.010G258000 5.0kb downstream 5.0kb downstream 5000   false Chr10: 59565131-59570130 Sorghum bicolor
Sobic.010G258000 10.0kb upstream 10.0kb upstream 12240   true Chr10: 59552891-59565130 Sorghum bicolor
Sobic.010G258000 10.0kb upstream 10.0kb upstream 10000   false Chr10: 59552891-59562890 Sorghum bicolor
Sobic.010G258000 10.0kb downstream 10.0kb downstream 12240   true Chr10: 59562891-59575130 Sorghum bicolor
Sobic.010G258000 10.0kb downstream 10.0kb downstream 10000   false Chr10: 59565131-59575130 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190027 5267 Panicoideae View MSA
124578378 5269 Grass View MSA
122041792 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121346769 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 116.368     High High
cufflinks 17.993     High Low
cufflinks 42.888     High  
cufflinks 74.669     High  
cufflinks 74.656     High  
cufflinks 51.492     High  
cufflinks 73.971     High  
cufflinks 30.448     High Low
cufflinks 66.593     High  
cufflinks 64.009     High  
cufflinks 87.762     High  
cufflinks 73.445     High  
cufflinks 65.049     High  
cufflinks 96.906     High  
cufflinks 89.249     High  
cufflinks 50.586     High  
cufflinks 79.935     High  
cufflinks 79.181     High  
cufflinks 32.321     High Low
cufflinks 89.865     High  
cufflinks 51.567     High  
cufflinks 130.592     High High
cufflinks 99.219     High  
cufflinks 101.829     High  
cufflinks 30.466     High Low
cufflinks 15.586     High Low
cufflinks 70.294     High  
cufflinks 141.415     High High
cufflinks 72.194     High  
cufflinks 105.675     High  

0 Strain