Gene : Sobic.010G255900 S. bicolor v3.1.1
Defline:  (1 of 3) K17808 - mitochondrial protein import protein ZIM17 (ZIM17, DNLZ, Tim15) Genomic Order:  2691
Name:  ? Sobic.010G255900 Secondary Identifier:  ? PAC:37909607
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G255900 0.5kb upstream 0.5kb upstream 2605   true Chr10: 59429547-59432151 Sorghum bicolor
Sobic.010G255900 0.5kb upstream 0.5kb upstream 500   false Chr10: 59431652-59432151 Sorghum bicolor
Sobic.010G255900 0.5kb downstream 0.5kb downstream 2605   true Chr10: 59429047-59431651 Sorghum bicolor
Sobic.010G255900 0.5kb downstream 0.5kb downstream 500   false Chr10: 59429047-59429546 Sorghum bicolor
Sobic.010G255900 1.0kb upstream 1.0kb upstream 3105   true Chr10: 59429547-59432651 Sorghum bicolor
Sobic.010G255900 1.0kb upstream 1.0kb upstream 1000   false Chr10: 59431652-59432651 Sorghum bicolor
Sobic.010G255900 1.0kb downstream 1.0kb downstream 3105   true Chr10: 59428547-59431651 Sorghum bicolor
Sobic.010G255900 1.0kb downstream 1.0kb downstream 1000   false Chr10: 59428547-59429546 Sorghum bicolor
Sobic.010G255900 2.0kb upstream 2.0kb upstream 4105   true Chr10: 59429547-59433651 Sorghum bicolor
Sobic.010G255900 2.0kb upstream 2.0kb upstream 2000   false Chr10: 59431652-59433651 Sorghum bicolor
Sobic.010G255900 2.0kb downstream 2.0kb downstream 4105   true Chr10: 59427547-59431651 Sorghum bicolor
Sobic.010G255900 2.0kb downstream 2.0kb downstream 2000   false Chr10: 59427547-59429546 Sorghum bicolor
Sobic.010G255900 5.0kb upstream 5.0kb upstream 7105   true Chr10: 59429547-59436651 Sorghum bicolor
Sobic.010G255900 5.0kb upstream 5.0kb upstream 5000   false Chr10: 59431652-59436651 Sorghum bicolor
Sobic.010G255900 5.0kb downstream 5.0kb downstream 7105   true Chr10: 59424547-59431651 Sorghum bicolor
Sobic.010G255900 5.0kb downstream 5.0kb downstream 5000   false Chr10: 59424547-59429546 Sorghum bicolor
Sobic.010G255900 10.0kb upstream 10.0kb upstream 12105   true Chr10: 59429547-59441651 Sorghum bicolor
Sobic.010G255900 10.0kb upstream 10.0kb upstream 10000   false Chr10: 59431652-59441651 Sorghum bicolor
Sobic.010G255900 10.0kb downstream 10.0kb downstream 12105   true Chr10: 59419547-59431651 Sorghum bicolor
Sobic.010G255900 10.0kb downstream 10.0kb downstream 10000   false Chr10: 59419547-59429546 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122147131 5267 Panicoideae Singleton cluster - no MSA
124439837 5269 Grass Singleton cluster - no MSA
122048491 5273 Angiosperm View MSA
121349693 5274 Embryophyte View MSA
123425918 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.676       High
cufflinks 0.943       Low
cufflinks 2.532        
cufflinks 5.036       High
cufflinks 1.582        
cufflinks 2.811        
cufflinks 1.415        
cufflinks 1.261        
cufflinks 2.218        
cufflinks 1.767        
cufflinks 2.09        
cufflinks 1.512        
cufflinks 1.021       Low
cufflinks 2.145        
cufflinks 3.052       High
cufflinks 2.211        
cufflinks 1.229        
cufflinks 1.687        
cufflinks 0.785       Low
cufflinks 1.742        
cufflinks 2.196        
cufflinks 1.754        
cufflinks 1.187        
cufflinks 1.409        
cufflinks 1.567        
cufflinks 0.836       Low
cufflinks 1.921        
cufflinks 7.388       High
cufflinks 2.674        
cufflinks 2.031        

0 Strain