Gene : Sobic.010G253200 S. bicolor v3.1.1
Defline:  (1 of 2) K12446 - L-arabinokinase (E2.7.1.46) Genomic Order:  2664
Name:  ? Sobic.010G253200 Secondary Identifier:  ? PAC:37908442
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor PWY-82 Sorghum bicolor pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G253200 0.5kb upstream 0.5kb upstream 8902   true Chr10: 59191422-59200323 Sorghum bicolor
Sobic.010G253200 0.5kb upstream 0.5kb upstream 500   false Chr10: 59191422-59191921 Sorghum bicolor
Sobic.010G253200 0.5kb downstream 0.5kb downstream 8902   true Chr10: 59191922-59200823 Sorghum bicolor
Sobic.010G253200 0.5kb downstream 0.5kb downstream 500   false Chr10: 59200324-59200823 Sorghum bicolor
Sobic.010G253200 1.0kb upstream 1.0kb upstream 9402   true Chr10: 59190922-59200323 Sorghum bicolor
Sobic.010G253200 1.0kb upstream 1.0kb upstream 1000   false Chr10: 59190922-59191921 Sorghum bicolor
Sobic.010G253200 1.0kb downstream 1.0kb downstream 9402   true Chr10: 59191922-59201323 Sorghum bicolor
Sobic.010G253200 1.0kb downstream 1.0kb downstream 1000   false Chr10: 59200324-59201323 Sorghum bicolor
Sobic.010G253200 2.0kb upstream 2.0kb upstream 10402   true Chr10: 59189922-59200323 Sorghum bicolor
Sobic.010G253200 2.0kb upstream 2.0kb upstream 2000   false Chr10: 59189922-59191921 Sorghum bicolor
Sobic.010G253200 2.0kb downstream 2.0kb downstream 10402   true Chr10: 59191922-59202323 Sorghum bicolor
Sobic.010G253200 2.0kb downstream 2.0kb downstream 2000   false Chr10: 59200324-59202323 Sorghum bicolor
Sobic.010G253200 5.0kb upstream 5.0kb upstream 13402   true Chr10: 59186922-59200323 Sorghum bicolor
Sobic.010G253200 5.0kb upstream 5.0kb upstream 5000   false Chr10: 59186922-59191921 Sorghum bicolor
Sobic.010G253200 5.0kb downstream 5.0kb downstream 13402   true Chr10: 59191922-59205323 Sorghum bicolor
Sobic.010G253200 5.0kb downstream 5.0kb downstream 5000   false Chr10: 59200324-59205323 Sorghum bicolor
Sobic.010G253200 10.0kb upstream 10.0kb upstream 18402   true Chr10: 59181922-59200323 Sorghum bicolor
Sobic.010G253200 10.0kb upstream 10.0kb upstream 10000   false Chr10: 59181922-59191921 Sorghum bicolor
Sobic.010G253200 10.0kb downstream 10.0kb downstream 18402   true Chr10: 59191922-59210323 Sorghum bicolor
Sobic.010G253200 10.0kb downstream 10.0kb downstream 10000   false Chr10: 59200324-59210323 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184142 5267 Panicoideae View MSA
124569857 5269 Grass View MSA
122044133 5273 Angiosperm View MSA
121345310 5274 Embryophyte View MSA
123424614 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.892        
cufflinks 0.043       Low
cufflinks 0.06       Low
cufflinks 0.029     Low Low
cufflinks 7.14        
cufflinks 0.062     Low Low
cufflinks 3.802        
cufflinks 1.334        
cufflinks 0.515        
cufflinks 0.713        
cufflinks 6.954        
cufflinks 5.508        
cufflinks 1.862        
cufflinks 7.064        
cufflinks 2.355        
cufflinks 0.089       Low
cufflinks 3.434        
cufflinks 4.097        
cufflinks 0.186       Low
cufflinks 3.001        
cufflinks 7.309        
cufflinks 11.548       High
cufflinks 7.622        
cufflinks 8.766        
cufflinks 0.038     Low Low
cufflinks 0.119       Low
cufflinks 2.626        
cufflinks 0.143       Low
cufflinks 5.124        
cufflinks 4.469        

0 Strain