Gene : Sobic.010G251600 S. bicolor v3.1.1
Defline:  (1 of 2) K02942 - large subunit ribosomal protein LP1 (RP-LP1, RPLP1) Genomic Order:  2647
Name:  ? Sobic.010G251600 Secondary Identifier:  ? PAC:37908789
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G251600 0.5kb upstream 0.5kb upstream 2026   true Chr10: 59099207-59101232 Sorghum bicolor
Sobic.010G251600 0.5kb upstream 0.5kb upstream 500   false Chr10: 59100733-59101232 Sorghum bicolor
Sobic.010G251600 0.5kb downstream 0.5kb downstream 2026   true Chr10: 59098707-59100732 Sorghum bicolor
Sobic.010G251600 0.5kb downstream 0.5kb downstream 500   false Chr10: 59098707-59099206 Sorghum bicolor
Sobic.010G251600 1.0kb upstream 1.0kb upstream 2526   true Chr10: 59099207-59101732 Sorghum bicolor
Sobic.010G251600 1.0kb upstream 1.0kb upstream 1000   false Chr10: 59100733-59101732 Sorghum bicolor
Sobic.010G251600 1.0kb downstream 1.0kb downstream 2526   true Chr10: 59098207-59100732 Sorghum bicolor
Sobic.010G251600 1.0kb downstream 1.0kb downstream 1000   false Chr10: 59098207-59099206 Sorghum bicolor
Sobic.010G251600 2.0kb upstream 2.0kb upstream 3526   true Chr10: 59099207-59102732 Sorghum bicolor
Sobic.010G251600 2.0kb upstream 2.0kb upstream 2000   false Chr10: 59100733-59102732 Sorghum bicolor
Sobic.010G251600 2.0kb downstream 2.0kb downstream 3526   true Chr10: 59097207-59100732 Sorghum bicolor
Sobic.010G251600 2.0kb downstream 2.0kb downstream 2000   false Chr10: 59097207-59099206 Sorghum bicolor
Sobic.010G251600 5.0kb upstream 5.0kb upstream 6526   true Chr10: 59099207-59105732 Sorghum bicolor
Sobic.010G251600 5.0kb upstream 5.0kb upstream 5000   false Chr10: 59100733-59105732 Sorghum bicolor
Sobic.010G251600 5.0kb downstream 5.0kb downstream 6526   true Chr10: 59094207-59100732 Sorghum bicolor
Sobic.010G251600 5.0kb downstream 5.0kb downstream 5000   false Chr10: 59094207-59099206 Sorghum bicolor
Sobic.010G251600 10.0kb upstream 10.0kb upstream 11526   true Chr10: 59099207-59110732 Sorghum bicolor
Sobic.010G251600 10.0kb upstream 10.0kb upstream 10000   false Chr10: 59100733-59110732 Sorghum bicolor
Sobic.010G251600 10.0kb downstream 10.0kb downstream 11526   true Chr10: 59089207-59100732 Sorghum bicolor
Sobic.010G251600 10.0kb downstream 10.0kb downstream 10000   false Chr10: 59089207-59099206 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184003 5267 Panicoideae View MSA
124577323 5269 Grass View MSA
122041994 5273 Angiosperm View MSA
121347271 5274 Embryophyte View MSA
123424793 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 191.134     High High
cufflinks 5.909       Low
cufflinks 8.758       Low
cufflinks 26.775     High  
cufflinks 25.64     High  
cufflinks 36.762     High  
cufflinks 25.54     High  
cufflinks 7.34       Low
cufflinks 15.61     High  
cufflinks 17.734     High  
cufflinks 42.79     High  
cufflinks 28.406     High  
cufflinks 11.753     High Low
cufflinks 42.394     High  
cufflinks 19.663     High  
cufflinks 8.456       Low
cufflinks 32.3     High  
cufflinks 33.244     High  
cufflinks 7.687       Low
cufflinks 23.084     High  
cufflinks 37.111     High  
cufflinks 92.525     High High
cufflinks 44.898     High  
cufflinks 46.194     High  
cufflinks 7.124       Low
cufflinks 3.047       Low
cufflinks 27.687     High  
cufflinks 86.654     High High
cufflinks 36.06     High  
cufflinks 33.745     High  

0 Strain