Gene : Sobic.010G240500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR24093//PTHR24093:SF272 - FAMILY NOT NAMED // CADMIUM/ZINC-TRANSPORTING ATPASE HMA1, CHLOROPLASTIC-RELATED Genomic Order:  2531
Name:  ? Sobic.010G240500 Secondary Identifier:  ? PAC:37908444
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G240500 0.5kb upstream 0.5kb upstream 12872   true Chr10: 58226427-58239298 Sorghum bicolor
Sobic.010G240500 0.5kb upstream 0.5kb upstream 500   false Chr10: 58238799-58239298 Sorghum bicolor
Sobic.010G240500 0.5kb downstream 0.5kb downstream 12872   true Chr10: 58225927-58238798 Sorghum bicolor
Sobic.010G240500 0.5kb downstream 0.5kb downstream 500   false Chr10: 58225927-58226426 Sorghum bicolor
Sobic.010G240500 1.0kb upstream 1.0kb upstream 13372   true Chr10: 58226427-58239798 Sorghum bicolor
Sobic.010G240500 1.0kb upstream 1.0kb upstream 1000   false Chr10: 58238799-58239798 Sorghum bicolor
Sobic.010G240500 1.0kb downstream 1.0kb downstream 13372   true Chr10: 58225427-58238798 Sorghum bicolor
Sobic.010G240500 1.0kb downstream 1.0kb downstream 1000   false Chr10: 58225427-58226426 Sorghum bicolor
Sobic.010G240500 2.0kb upstream 2.0kb upstream 14372   true Chr10: 58226427-58240798 Sorghum bicolor
Sobic.010G240500 2.0kb upstream 2.0kb upstream 2000   false Chr10: 58238799-58240798 Sorghum bicolor
Sobic.010G240500 2.0kb downstream 2.0kb downstream 14372   true Chr10: 58224427-58238798 Sorghum bicolor
Sobic.010G240500 2.0kb downstream 2.0kb downstream 2000   false Chr10: 58224427-58226426 Sorghum bicolor
Sobic.010G240500 5.0kb upstream 5.0kb upstream 17372   true Chr10: 58226427-58243798 Sorghum bicolor
Sobic.010G240500 5.0kb upstream 5.0kb upstream 5000   false Chr10: 58238799-58243798 Sorghum bicolor
Sobic.010G240500 5.0kb downstream 5.0kb downstream 17372   true Chr10: 58221427-58238798 Sorghum bicolor
Sobic.010G240500 5.0kb downstream 5.0kb downstream 5000   false Chr10: 58221427-58226426 Sorghum bicolor
Sobic.010G240500 10.0kb upstream 10.0kb upstream 22372   true Chr10: 58226427-58248798 Sorghum bicolor
Sobic.010G240500 10.0kb upstream 10.0kb upstream 10000   false Chr10: 58238799-58248798 Sorghum bicolor
Sobic.010G240500 10.0kb downstream 10.0kb downstream 22372   true Chr10: 58216427-58238798 Sorghum bicolor
Sobic.010G240500 10.0kb downstream 10.0kb downstream 10000   false Chr10: 58216427-58226426 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190141 5267 Panicoideae View MSA
124573938 5269 Grass View MSA
122049253 5273 Angiosperm View MSA
121346683 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.318       Low
cufflinks 2.877       High
cufflinks 1.278        
cufflinks 1.328        
cufflinks 1.074        
cufflinks 2.038        
cufflinks 1.817        
cufflinks 4.572       High
cufflinks 1.66        
cufflinks 1.446        
cufflinks 0.817        
cufflinks 0.925        
cufflinks 1.588        
cufflinks 0.796        
cufflinks 1.17        
cufflinks 1.732        
cufflinks 1.649        
cufflinks 1.826        
cufflinks 1.518        
cufflinks 1.501        
cufflinks 0.841        
cufflinks 0.65       Low
cufflinks 0.808        
cufflinks 0.763        
cufflinks 3.134       High
cufflinks 5.96       High
cufflinks 0.814        
cufflinks 0.576       Low
cufflinks 2.744       High
cufflinks 1.146        

0 Strain