Gene : Sobic.010G236100 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR10774:SF62 - SYNAPTOTAGMIN-3 Genomic Order:  2489
Name:  ? Sobic.010G236100 Secondary Identifier:  ? PAC:37910621
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G236100 0.5kb upstream 0.5kb upstream 8071   true Chr10: 57838767-57846837 Sorghum bicolor
Sobic.010G236100 0.5kb upstream 0.5kb upstream 500   false Chr10: 57838767-57839266 Sorghum bicolor
Sobic.010G236100 0.5kb downstream 0.5kb downstream 8071   true Chr10: 57839267-57847337 Sorghum bicolor
Sobic.010G236100 0.5kb downstream 0.5kb downstream 500   false Chr10: 57846838-57847337 Sorghum bicolor
Sobic.010G236100 1.0kb upstream 1.0kb upstream 8571   true Chr10: 57838267-57846837 Sorghum bicolor
Sobic.010G236100 1.0kb upstream 1.0kb upstream 1000   false Chr10: 57838267-57839266 Sorghum bicolor
Sobic.010G236100 1.0kb downstream 1.0kb downstream 8571   true Chr10: 57839267-57847837 Sorghum bicolor
Sobic.010G236100 1.0kb downstream 1.0kb downstream 1000   false Chr10: 57846838-57847837 Sorghum bicolor
Sobic.010G236100 2.0kb upstream 2.0kb upstream 9571   true Chr10: 57837267-57846837 Sorghum bicolor
Sobic.010G236100 2.0kb upstream 2.0kb upstream 2000   false Chr10: 57837267-57839266 Sorghum bicolor
Sobic.010G236100 2.0kb downstream 2.0kb downstream 9571   true Chr10: 57839267-57848837 Sorghum bicolor
Sobic.010G236100 2.0kb downstream 2.0kb downstream 2000   false Chr10: 57846838-57848837 Sorghum bicolor
Sobic.010G236100 5.0kb upstream 5.0kb upstream 12571   true Chr10: 57834267-57846837 Sorghum bicolor
Sobic.010G236100 5.0kb upstream 5.0kb upstream 5000   false Chr10: 57834267-57839266 Sorghum bicolor
Sobic.010G236100 5.0kb downstream 5.0kb downstream 12571   true Chr10: 57839267-57851837 Sorghum bicolor
Sobic.010G236100 5.0kb downstream 5.0kb downstream 5000   false Chr10: 57846838-57851837 Sorghum bicolor
Sobic.010G236100 10.0kb upstream 10.0kb upstream 17571   true Chr10: 57829267-57846837 Sorghum bicolor
Sobic.010G236100 10.0kb upstream 10.0kb upstream 10000   false Chr10: 57829267-57839266 Sorghum bicolor
Sobic.010G236100 10.0kb downstream 10.0kb downstream 17571   true Chr10: 57839267-57856837 Sorghum bicolor
Sobic.010G236100 10.0kb downstream 10.0kb downstream 10000   false Chr10: 57846838-57856837 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181479 5267 Panicoideae View MSA
124579072 5269 Grass View MSA
122046741 5273 Angiosperm View MSA
123429031 5275 Viridiplantae View MSA
121310651 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.179        
cufflinks 0.093        
cufflinks 0.446        
cufflinks 0.237        
cufflinks 0.058     Low  
cufflinks 0.07     Low  
cufflinks 0.141        
cufflinks 0.071        
cufflinks 0.23        
cufflinks 0.199        
cufflinks 0.23        
cufflinks 0.601       High
cufflinks 0.031     Low Low
cufflinks 1.288       High
cufflinks 0.375        
cufflinks 0.265        
cufflinks 0.159        
cufflinks 0.1        
cufflinks 0.074     Low  
cufflinks 0.133        
cufflinks 0.007     Low Low
cufflinks 0.442        
cufflinks 0.796       High
cufflinks 0.583       High
cufflinks 0.07        
cufflinks 0.041       Low
cufflinks 1.616       High
cufflinks 0.21        
cufflinks 0.127        
cufflinks 0.54        

0 Strain