Gene : Sobic.010G236200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR19306//PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 // STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 Genomic Order:  2490
Name:  ? Sobic.010G236200 Secondary Identifier:  ? PAC:37909111
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G236200 0.5kb upstream 0.5kb upstream 13077   true Chr10: 57846887-57859963 Sorghum bicolor
Sobic.010G236200 0.5kb upstream 0.5kb upstream 500   false Chr10: 57859464-57859963 Sorghum bicolor
Sobic.010G236200 0.5kb downstream 0.5kb downstream 13077   true Chr10: 57846387-57859463 Sorghum bicolor
Sobic.010G236200 0.5kb downstream 0.5kb downstream 500   false Chr10: 57846387-57846886 Sorghum bicolor
Sobic.010G236200 1.0kb upstream 1.0kb upstream 13577   true Chr10: 57846887-57860463 Sorghum bicolor
Sobic.010G236200 1.0kb upstream 1.0kb upstream 1000   false Chr10: 57859464-57860463 Sorghum bicolor
Sobic.010G236200 1.0kb downstream 1.0kb downstream 13577   true Chr10: 57845887-57859463 Sorghum bicolor
Sobic.010G236200 1.0kb downstream 1.0kb downstream 1000   false Chr10: 57845887-57846886 Sorghum bicolor
Sobic.010G236200 2.0kb upstream 2.0kb upstream 14577   true Chr10: 57846887-57861463 Sorghum bicolor
Sobic.010G236200 2.0kb upstream 2.0kb upstream 2000   false Chr10: 57859464-57861463 Sorghum bicolor
Sobic.010G236200 2.0kb downstream 2.0kb downstream 14577   true Chr10: 57844887-57859463 Sorghum bicolor
Sobic.010G236200 2.0kb downstream 2.0kb downstream 2000   false Chr10: 57844887-57846886 Sorghum bicolor
Sobic.010G236200 5.0kb upstream 5.0kb upstream 17577   true Chr10: 57846887-57864463 Sorghum bicolor
Sobic.010G236200 5.0kb upstream 5.0kb upstream 5000   false Chr10: 57859464-57864463 Sorghum bicolor
Sobic.010G236200 5.0kb downstream 5.0kb downstream 17577   true Chr10: 57841887-57859463 Sorghum bicolor
Sobic.010G236200 5.0kb downstream 5.0kb downstream 5000   false Chr10: 57841887-57846886 Sorghum bicolor
Sobic.010G236200 10.0kb upstream 10.0kb upstream 22577   true Chr10: 57846887-57869463 Sorghum bicolor
Sobic.010G236200 10.0kb upstream 10.0kb upstream 10000   false Chr10: 57859464-57869463 Sorghum bicolor
Sobic.010G236200 10.0kb downstream 10.0kb downstream 22577   true Chr10: 57836887-57859463 Sorghum bicolor
Sobic.010G236200 10.0kb downstream 10.0kb downstream 10000   false Chr10: 57836887-57846886 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187106 5267 Panicoideae View MSA
124578772 5269 Grass View MSA
122042538 5273 Angiosperm View MSA
121345004 5274 Embryophyte View MSA
123424617 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.746        
cufflinks 0.388       Low
cufflinks 1.189       Low
cufflinks 1.738        
cufflinks 8.02       High
cufflinks 2.765        
cufflinks 3.377        
cufflinks 0.663       Low
cufflinks 3.866        
cufflinks 4.11        
cufflinks 3.308        
cufflinks 4.257        
cufflinks 3.004        
cufflinks 2.729        
cufflinks 3.882        
cufflinks 1.174       Low
cufflinks 3.463        
cufflinks 3.681        
cufflinks 1.754        
cufflinks 3.369        
cufflinks 17.181     High High
cufflinks 3.324        
cufflinks 3.346        
cufflinks 3.025        
cufflinks 1.22        
cufflinks 0.389       Low
cufflinks 3.12        
cufflinks 0.936       Low
cufflinks 1.749        
cufflinks 5.652        

0 Strain