Gene : Sobic.010G274500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11465//PTHR11465:SF20 - CATALASE // SUBFAMILY NOT NAMED Genomic Order:  2888
Name:  ? Sobic.010G274500 Secondary Identifier:  ? PAC:37912446
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sbicolor DETOX1-PWY Sorghum bicolor pathologic  
Sbicolor DETOX1-PWY-1 Sorghum bicolor pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G274500 0.5kb upstream 0.5kb upstream 5262   true Chr10: 60780516-60785777 Sorghum bicolor
Sobic.010G274500 0.5kb upstream 0.5kb upstream 500   false Chr10: 60780516-60781015 Sorghum bicolor
Sobic.010G274500 0.5kb downstream 0.5kb downstream 5262   true Chr10: 60781016-60786277 Sorghum bicolor
Sobic.010G274500 0.5kb downstream 0.5kb downstream 500   false Chr10: 60785778-60786277 Sorghum bicolor
Sobic.010G274500 1.0kb upstream 1.0kb upstream 5762   true Chr10: 60780016-60785777 Sorghum bicolor
Sobic.010G274500 1.0kb upstream 1.0kb upstream 1000   false Chr10: 60780016-60781015 Sorghum bicolor
Sobic.010G274500 1.0kb downstream 1.0kb downstream 5762   true Chr10: 60781016-60786777 Sorghum bicolor
Sobic.010G274500 1.0kb downstream 1.0kb downstream 1000   false Chr10: 60785778-60786777 Sorghum bicolor
Sobic.010G274500 2.0kb upstream 2.0kb upstream 6762   true Chr10: 60779016-60785777 Sorghum bicolor
Sobic.010G274500 2.0kb upstream 2.0kb upstream 2000   false Chr10: 60779016-60781015 Sorghum bicolor
Sobic.010G274500 2.0kb downstream 2.0kb downstream 6762   true Chr10: 60781016-60787777 Sorghum bicolor
Sobic.010G274500 2.0kb downstream 2.0kb downstream 2000   false Chr10: 60785778-60787777 Sorghum bicolor
Sobic.010G274500 5.0kb upstream 5.0kb upstream 9762   true Chr10: 60776016-60785777 Sorghum bicolor
Sobic.010G274500 5.0kb upstream 5.0kb upstream 5000   false Chr10: 60776016-60781015 Sorghum bicolor
Sobic.010G274500 5.0kb downstream 5.0kb downstream 9762   true Chr10: 60781016-60790777 Sorghum bicolor
Sobic.010G274500 5.0kb downstream 5.0kb downstream 5000   false Chr10: 60785778-60790777 Sorghum bicolor
Sobic.010G274500 10.0kb upstream 10.0kb upstream 14762   true Chr10: 60771016-60785777 Sorghum bicolor
Sobic.010G274500 10.0kb upstream 10.0kb upstream 10000   false Chr10: 60771016-60781015 Sorghum bicolor
Sobic.010G274500 10.0kb downstream 10.0kb downstream 14762   true Chr10: 60781016-60795777 Sorghum bicolor
Sobic.010G274500 10.0kb downstream 10.0kb downstream 10000   false Chr10: 60785778-60795777 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040958 5273 Angiosperm View MSA
122185448 5267 Panicoideae View MSA
124575964 5269 Grass View MSA
121344781 5274 Embryophyte View MSA
123424047 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 63.493     High  
cufflinks 8.243     High Low
cufflinks 12.765     High Low
cufflinks 14.03     High Low
cufflinks 55.649     High  
cufflinks 12.533       Low
cufflinks 33.722     High  
cufflinks 19.587     High  
cufflinks 76.723     High  
cufflinks 97.52     High High
cufflinks 85.333     High  
cufflinks 81.992     High  
cufflinks 58.64     High  
cufflinks 117.794     High High
cufflinks 42.282     High  
cufflinks 10.162     High Low
cufflinks 30.592     High  
cufflinks 33.001     High  
cufflinks 13.36     High Low
cufflinks 28.334     High  
cufflinks 54.363     High  
cufflinks 78.051     High  
cufflinks 90.655     High  
cufflinks 98.378     High High
cufflinks 8.489       Low
cufflinks 13.258     High Low
cufflinks 84.085     High  
cufflinks 184.996     High High
cufflinks 29.779     High  
cufflinks 56.382     High  

0 Strain