Gene : Sobic.010G268100 S. bicolor v3.1.1
Defline:  (1 of 1) 5.4.99.23 - 23S rRNA pseudouridine(1911/1915/1917) synthase Genomic Order:  2824
Name:  ? Sobic.010G268100 Secondary Identifier:  ? PAC:37908890
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G268100 0.5kb upstream 0.5kb upstream 3711   true Chr10: 60275497-60279207 Sorghum bicolor
Sobic.010G268100 0.5kb upstream 0.5kb upstream 500   false Chr10: 60278708-60279207 Sorghum bicolor
Sobic.010G268100 0.5kb downstream 0.5kb downstream 3711   true Chr10: 60274997-60278707 Sorghum bicolor
Sobic.010G268100 0.5kb downstream 0.5kb downstream 500   false Chr10: 60274997-60275496 Sorghum bicolor
Sobic.010G268100 1.0kb upstream 1.0kb upstream 4211   true Chr10: 60275497-60279707 Sorghum bicolor
Sobic.010G268100 1.0kb upstream 1.0kb upstream 1000   false Chr10: 60278708-60279707 Sorghum bicolor
Sobic.010G268100 1.0kb downstream 1.0kb downstream 4211   true Chr10: 60274497-60278707 Sorghum bicolor
Sobic.010G268100 1.0kb downstream 1.0kb downstream 1000   false Chr10: 60274497-60275496 Sorghum bicolor
Sobic.010G268100 2.0kb upstream 2.0kb upstream 5211   true Chr10: 60275497-60280707 Sorghum bicolor
Sobic.010G268100 2.0kb upstream 2.0kb upstream 2000   false Chr10: 60278708-60280707 Sorghum bicolor
Sobic.010G268100 2.0kb downstream 2.0kb downstream 5211   true Chr10: 60273497-60278707 Sorghum bicolor
Sobic.010G268100 2.0kb downstream 2.0kb downstream 2000   false Chr10: 60273497-60275496 Sorghum bicolor
Sobic.010G268100 5.0kb upstream 5.0kb upstream 8211   true Chr10: 60275497-60283707 Sorghum bicolor
Sobic.010G268100 5.0kb upstream 5.0kb upstream 5000   false Chr10: 60278708-60283707 Sorghum bicolor
Sobic.010G268100 5.0kb downstream 5.0kb downstream 8211   true Chr10: 60270497-60278707 Sorghum bicolor
Sobic.010G268100 5.0kb downstream 5.0kb downstream 5000   false Chr10: 60270497-60275496 Sorghum bicolor
Sobic.010G268100 10.0kb upstream 10.0kb upstream 13211   true Chr10: 60275497-60288707 Sorghum bicolor
Sobic.010G268100 10.0kb upstream 10.0kb upstream 10000   false Chr10: 60278708-60288707 Sorghum bicolor
Sobic.010G268100 10.0kb downstream 10.0kb downstream 13211   true Chr10: 60265497-60278707 Sorghum bicolor
Sobic.010G268100 10.0kb downstream 10.0kb downstream 10000   false Chr10: 60265497-60275496 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181937 5267 Panicoideae View MSA
124572394 5269 Grass View MSA
122047561 5273 Angiosperm View MSA
121344474 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.629        
cufflinks 0.192       Low
cufflinks 0.744        
cufflinks 1.188       High
cufflinks 0.97        
cufflinks 1.545       High
cufflinks 0.763        
cufflinks 0.56        
cufflinks 0.909        
cufflinks 1.008        
cufflinks 0.465        
cufflinks 0.559        
cufflinks 0.987        
cufflinks 0.511        
cufflinks 0.856        
cufflinks 0.641        
cufflinks 0.86        
cufflinks 0.998        
cufflinks 0.851        
cufflinks 0.767        
cufflinks 1.193       High
cufflinks 0.469        
cufflinks 0.563        
cufflinks 0.482        
cufflinks 0.476        
cufflinks 0.17       Low
cufflinks 0.573        
cufflinks 0.302       Low
cufflinks 1.488       High
cufflinks 1.047        

0 Strain