Gene : Sobic.010G260500 S. bicolor v3.1.1
Defline:  (1 of 1) K12868 - pre-mRNA-splicing factor SYF2 (SYF2) Genomic Order:  2742
Name:  ? Sobic.010G260500 Secondary Identifier:  ? PAC:37909367
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.010G260500 0.5kb upstream 0.5kb upstream 3381   true Chr10: 59705829-59709209 Sorghum bicolor
Sobic.010G260500 0.5kb upstream 0.5kb upstream 500   false Chr10: 59705829-59706328 Sorghum bicolor
Sobic.010G260500 0.5kb downstream 0.5kb downstream 3381   true Chr10: 59706329-59709709 Sorghum bicolor
Sobic.010G260500 0.5kb downstream 0.5kb downstream 500   false Chr10: 59709210-59709709 Sorghum bicolor
Sobic.010G260500 1.0kb upstream 1.0kb upstream 3881   true Chr10: 59705329-59709209 Sorghum bicolor
Sobic.010G260500 1.0kb upstream 1.0kb upstream 1000   false Chr10: 59705329-59706328 Sorghum bicolor
Sobic.010G260500 1.0kb downstream 1.0kb downstream 3881   true Chr10: 59706329-59710209 Sorghum bicolor
Sobic.010G260500 1.0kb downstream 1.0kb downstream 1000   false Chr10: 59709210-59710209 Sorghum bicolor
Sobic.010G260500 2.0kb upstream 2.0kb upstream 4881   true Chr10: 59704329-59709209 Sorghum bicolor
Sobic.010G260500 2.0kb upstream 2.0kb upstream 2000   false Chr10: 59704329-59706328 Sorghum bicolor
Sobic.010G260500 2.0kb downstream 2.0kb downstream 4881   true Chr10: 59706329-59711209 Sorghum bicolor
Sobic.010G260500 2.0kb downstream 2.0kb downstream 2000   false Chr10: 59709210-59711209 Sorghum bicolor
Sobic.010G260500 5.0kb upstream 5.0kb upstream 7881   true Chr10: 59701329-59709209 Sorghum bicolor
Sobic.010G260500 5.0kb upstream 5.0kb upstream 5000   false Chr10: 59701329-59706328 Sorghum bicolor
Sobic.010G260500 5.0kb downstream 5.0kb downstream 7881   true Chr10: 59706329-59714209 Sorghum bicolor
Sobic.010G260500 5.0kb downstream 5.0kb downstream 5000   false Chr10: 59709210-59714209 Sorghum bicolor
Sobic.010G260500 10.0kb upstream 10.0kb upstream 12881   true Chr10: 59696329-59709209 Sorghum bicolor
Sobic.010G260500 10.0kb upstream 10.0kb upstream 10000   false Chr10: 59696329-59706328 Sorghum bicolor
Sobic.010G260500 10.0kb downstream 10.0kb downstream 12881   true Chr10: 59706329-59719209 Sorghum bicolor
Sobic.010G260500 10.0kb downstream 10.0kb downstream 10000   false Chr10: 59709210-59719209 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175365 5267 Panicoideae View MSA
124583145 5269 Grass View MSA
122049804 5273 Angiosperm View MSA
121347073 5274 Embryophyte View MSA
123424870 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.481     High High
cufflinks 15.741     High Low
cufflinks 22.865     High  
cufflinks 31.081     High High
cufflinks 16.586     High Low
cufflinks 33.275     High High
cufflinks 23.539     High  
cufflinks 14.963     High Low
cufflinks 32.965     High High
cufflinks 35.31     High High
cufflinks 23.374     High  
cufflinks 27.916     High  
cufflinks 27.16     High  
cufflinks 26.984     High  
cufflinks 26.416     High  
cufflinks 26.768     High  
cufflinks 24.166     High  
cufflinks 25.406     High  
cufflinks 31.88     High High
cufflinks 30.528     High  
cufflinks 25.333     High  
cufflinks 24.314     High  
cufflinks 26.56     High  
cufflinks 24.837     High  
cufflinks 21.588     High  
cufflinks 12.437     High Low
cufflinks 21.688     High  
cufflinks 41.9     High High
cufflinks 17.934     High Low
cufflinks 26.311     High  

0 Strain