Gene : Sobic.003G001500 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR33785//PTHR33785:SF1 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, BAC CLONE:F4B12 Genomic Order:  15
Name:  ? Sobic.003G001500 Secondary Identifier:  ? PAC:37916821
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G001500 0.5kb upstream 0.5kb upstream 7558 true Chr03: 165202-172759 Sorghum bicolor
Sobic.003G001500 0.5kb upstream 0.5kb upstream 500 false Chr03: 172260-172759 Sorghum bicolor
Sobic.003G001500 0.5kb downstream 0.5kb downstream 7558 true Chr03: 164702-172259 Sorghum bicolor
Sobic.003G001500 0.5kb downstream 0.5kb downstream 500 false Chr03: 164702-165201 Sorghum bicolor
Sobic.003G001500 1.0kb upstream 1.0kb upstream 8058 true Chr03: 165202-173259 Sorghum bicolor
Sobic.003G001500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 172260-173259 Sorghum bicolor
Sobic.003G001500 1.0kb downstream 1.0kb downstream 8058 true Chr03: 164202-172259 Sorghum bicolor
Sobic.003G001500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 164202-165201 Sorghum bicolor
Sobic.003G001500 2.0kb upstream 2.0kb upstream 9058 true Chr03: 165202-174259 Sorghum bicolor
Sobic.003G001500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 172260-174259 Sorghum bicolor
Sobic.003G001500 2.0kb downstream 2.0kb downstream 9058 true Chr03: 163202-172259 Sorghum bicolor
Sobic.003G001500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 163202-165201 Sorghum bicolor
Sobic.003G001500 5.0kb upstream 5.0kb upstream 12058 true Chr03: 165202-177259 Sorghum bicolor
Sobic.003G001500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 172260-177259 Sorghum bicolor
Sobic.003G001500 5.0kb downstream 5.0kb downstream 12058 true Chr03: 160202-172259 Sorghum bicolor
Sobic.003G001500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 160202-165201 Sorghum bicolor
Sobic.003G001500 10.0kb upstream 10.0kb upstream 17058 true Chr03: 165202-182259 Sorghum bicolor
Sobic.003G001500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 172260-182259 Sorghum bicolor
Sobic.003G001500 10.0kb downstream 10.0kb downstream 17058 true Chr03: 155202-172259 Sorghum bicolor
Sobic.003G001500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 155202-165201 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191267 5267 Panicoideae View MSA
124569088 5269 Grass View MSA
122048968 5273 Angiosperm View MSA
121350568 5274 Embryophyte View MSA
123381799 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.403        
cufflinks 0.422        
cufflinks 0.662        
cufflinks 0.749        
cufflinks 0.884        
cufflinks 1.354       High
cufflinks 0.474        
cufflinks 0.534        
cufflinks 2.732       High
cufflinks 2.186       High
cufflinks 0.471        
cufflinks 0.714        
cufflinks 0.987        
cufflinks 0.581        
cufflinks 0.739        
cufflinks 0.619        
cufflinks 0.346       Low
cufflinks 0.288       Low
cufflinks 0.543        
cufflinks 0.641        
cufflinks 1.537       High
cufflinks 1.628       High
cufflinks 0.376        
cufflinks 0.341       Low
cufflinks 0.869        
cufflinks 0.634        
cufflinks 0.156       Low
cufflinks 1.207       High
cufflinks 0.746        
cufflinks 0.795        

0 Strain