Gene : Sobic.003G007000 S. bicolor v3.1.1
Defline:  (1 of 10) PF03101//PF10551 - FAR1 DNA-binding domain (FAR1) // MULE transposase domain (MULE) Genomic Order:  72
Name:  ? Sobic.003G007000 Secondary Identifier:  ? PAC:37918243
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G007000 0.5kb upstream 0.5kb upstream 4817 true Chr03: 615800-620616 Sorghum bicolor
Sobic.003G007000 0.5kb upstream 0.5kb upstream 500 false Chr03: 620117-620616 Sorghum bicolor
Sobic.003G007000 0.5kb downstream 0.5kb downstream 4817 true Chr03: 615300-620116 Sorghum bicolor
Sobic.003G007000 0.5kb downstream 0.5kb downstream 500 false Chr03: 615300-615799 Sorghum bicolor
Sobic.003G007000 1.0kb upstream 1.0kb upstream 5317 true Chr03: 615800-621116 Sorghum bicolor
Sobic.003G007000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 620117-621116 Sorghum bicolor
Sobic.003G007000 1.0kb downstream 1.0kb downstream 5317 true Chr03: 614800-620116 Sorghum bicolor
Sobic.003G007000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 614800-615799 Sorghum bicolor
Sobic.003G007000 2.0kb upstream 2.0kb upstream 6317 true Chr03: 615800-622116 Sorghum bicolor
Sobic.003G007000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 620117-622116 Sorghum bicolor
Sobic.003G007000 2.0kb downstream 2.0kb downstream 6317 true Chr03: 613800-620116 Sorghum bicolor
Sobic.003G007000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 613800-615799 Sorghum bicolor
Sobic.003G007000 5.0kb upstream 5.0kb upstream 9317 true Chr03: 615800-625116 Sorghum bicolor
Sobic.003G007000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 620117-625116 Sorghum bicolor
Sobic.003G007000 5.0kb downstream 5.0kb downstream 9317 true Chr03: 610800-620116 Sorghum bicolor
Sobic.003G007000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 610800-615799 Sorghum bicolor
Sobic.003G007000 10.0kb upstream 10.0kb upstream 14317 true Chr03: 615800-630116 Sorghum bicolor
Sobic.003G007000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 620117-630116 Sorghum bicolor
Sobic.003G007000 10.0kb downstream 10.0kb downstream 14317 true Chr03: 605800-620116 Sorghum bicolor
Sobic.003G007000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 605800-615799 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031606 5273 Angiosperm View MSA
122198051 5267 Panicoideae View MSA
124589040 5269 Grass View MSA
121300621 5274 Embryophyte View MSA
123338368 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.114        
cufflinks 0.034     Low  
cufflinks 0.032     Low  
cufflinks 0.002     Low Low
cufflinks 0.123        
cufflinks 0.084        
cufflinks 0.05     Low  
cufflinks 0.06     Low  
cufflinks 0.08        
cufflinks 0.051     Low  
cufflinks 0.099        
cufflinks 0.003     Low Low
cufflinks 0.046     Low  
cufflinks 0.026     Low  
cufflinks 0.014     Low  
cufflinks 0.048     Low  
cufflinks 0.003     Low Low
cufflinks 0.132        
cufflinks 0.092     Low  
cufflinks 0.101        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.005     Low Low
cufflinks 0.009     Low Low
cufflinks 0.177       High

0 Strain