Gene : Sobic.003G012000 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11649//PTHR11649:SF5 - MSS1/TRME-RELATED GTP-BINDING PROTEIN // GTP-BINDING PROTEIN Genomic Order:  127
Name:  ? Sobic.003G012000 Secondary Identifier:  ? PAC:37918270
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G012000 0.5kb upstream 0.5kb upstream 6107 true Chr03: 1034034-1040140 Sorghum bicolor
Sobic.003G012000 0.5kb upstream 0.5kb upstream 500 false Chr03: 1039641-1040140 Sorghum bicolor
Sobic.003G012000 0.5kb downstream 0.5kb downstream 6107 true Chr03: 1033534-1039640 Sorghum bicolor
Sobic.003G012000 0.5kb downstream 0.5kb downstream 500 false Chr03: 1033534-1034033 Sorghum bicolor
Sobic.003G012000 1.0kb upstream 1.0kb upstream 6607 true Chr03: 1034034-1040640 Sorghum bicolor
Sobic.003G012000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1039641-1040640 Sorghum bicolor
Sobic.003G012000 1.0kb downstream 1.0kb downstream 6607 true Chr03: 1033034-1039640 Sorghum bicolor
Sobic.003G012000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1033034-1034033 Sorghum bicolor
Sobic.003G012000 2.0kb upstream 2.0kb upstream 7607 true Chr03: 1034034-1041640 Sorghum bicolor
Sobic.003G012000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1039641-1041640 Sorghum bicolor
Sobic.003G012000 2.0kb downstream 2.0kb downstream 7607 true Chr03: 1032034-1039640 Sorghum bicolor
Sobic.003G012000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1032034-1034033 Sorghum bicolor
Sobic.003G012000 5.0kb upstream 5.0kb upstream 10607 true Chr03: 1034034-1044640 Sorghum bicolor
Sobic.003G012000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1039641-1044640 Sorghum bicolor
Sobic.003G012000 5.0kb downstream 5.0kb downstream 10607 true Chr03: 1029034-1039640 Sorghum bicolor
Sobic.003G012000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1029034-1034033 Sorghum bicolor
Sobic.003G012000 10.0kb upstream 10.0kb upstream 15607 true Chr03: 1034034-1049640 Sorghum bicolor
Sobic.003G012000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1039641-1049640 Sorghum bicolor
Sobic.003G012000 10.0kb downstream 10.0kb downstream 15607 true Chr03: 1024034-1039640 Sorghum bicolor
Sobic.003G012000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1024034-1034033 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186085 5267 Panicoideae View MSA
124581098 5269 Grass View MSA
122045813 5273 Angiosperm View MSA
121347341 5274 Embryophyte View MSA
123428429 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.961       High
cufflinks 0.693       Low
cufflinks 0.916       Low
cufflinks 1.578        
cufflinks 2.584        
cufflinks 1.984        
cufflinks 1.667        
cufflinks 0.469       Low
cufflinks 2.787        
cufflinks 3.032       High
cufflinks 1.733        
cufflinks 2.239        
cufflinks 1.754        
cufflinks 1.847        
cufflinks 2.043        
cufflinks 0.974       Low
cufflinks 1.439        
cufflinks 1.737        
cufflinks 0.634       Low
cufflinks 1.811        
cufflinks 4.413       High
cufflinks 2.54        
cufflinks 2.151        
cufflinks 2.393        
cufflinks 1.015        
cufflinks 0.7       Low
cufflinks 1.988        
cufflinks 2.857        
cufflinks 1.048        
cufflinks 2.839        

0 Strain