Gene : Sobic.003G014000 S. bicolor v3.1.1
Defline:  (1 of 1) PF03417 - Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase (AAT) Genomic Order:  147
Name:  ? Sobic.003G014000 Secondary Identifier:  ? PAC:37915090
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G014000 0.5kb upstream 0.5kb upstream 8601 true Chr03: 1244051-1252651 Sorghum bicolor
Sobic.003G014000 0.5kb upstream 0.5kb upstream 500 false Chr03: 1244051-1244550 Sorghum bicolor
Sobic.003G014000 0.5kb downstream 0.5kb downstream 8601 true Chr03: 1244551-1253151 Sorghum bicolor
Sobic.003G014000 0.5kb downstream 0.5kb downstream 500 false Chr03: 1252652-1253151 Sorghum bicolor
Sobic.003G014000 1.0kb upstream 1.0kb upstream 9101 true Chr03: 1243551-1252651 Sorghum bicolor
Sobic.003G014000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1243551-1244550 Sorghum bicolor
Sobic.003G014000 1.0kb downstream 1.0kb downstream 9101 true Chr03: 1244551-1253651 Sorghum bicolor
Sobic.003G014000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1252652-1253651 Sorghum bicolor
Sobic.003G014000 2.0kb upstream 2.0kb upstream 10101 true Chr03: 1242551-1252651 Sorghum bicolor
Sobic.003G014000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1242551-1244550 Sorghum bicolor
Sobic.003G014000 2.0kb downstream 2.0kb downstream 10101 true Chr03: 1244551-1254651 Sorghum bicolor
Sobic.003G014000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1252652-1254651 Sorghum bicolor
Sobic.003G014000 5.0kb upstream 5.0kb upstream 13101 true Chr03: 1239551-1252651 Sorghum bicolor
Sobic.003G014000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1239551-1244550 Sorghum bicolor
Sobic.003G014000 5.0kb downstream 5.0kb downstream 13101 true Chr03: 1244551-1257651 Sorghum bicolor
Sobic.003G014000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1252652-1257651 Sorghum bicolor
Sobic.003G014000 10.0kb upstream 10.0kb upstream 18101 true Chr03: 1234551-1252651 Sorghum bicolor
Sobic.003G014000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1234551-1244550 Sorghum bicolor
Sobic.003G014000 10.0kb downstream 10.0kb downstream 18101 true Chr03: 1244551-1262651 Sorghum bicolor
Sobic.003G014000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1252652-1262651 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193327 5267 Panicoideae View MSA
124585252 5269 Grass View MSA
122048477 5273 Angiosperm View MSA
121348469 5274 Embryophyte View MSA
123380874 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.651        
cufflinks 0.358       Low
cufflinks 2.355        
cufflinks 1.9        
cufflinks 2.206        
cufflinks 1.596        
cufflinks 3.01        
cufflinks 1.872        
cufflinks 3.278        
cufflinks 2.725        
cufflinks 0.211       Low
cufflinks 3.68       High
cufflinks 5.724       High
cufflinks 0.752        
cufflinks 3.463        
cufflinks 2.091        
cufflinks 2.167        
cufflinks 2.763        
cufflinks 1.614        
cufflinks 1.965        
cufflinks 7.139       High
cufflinks 0.658       Low
cufflinks 1.33        
cufflinks 1.294        
cufflinks 0.757        
cufflinks 0.288       Low
cufflinks 0.38       Low
cufflinks 0.424       Low
cufflinks 3.826       High
cufflinks 1.425        

0 Strain