Gene : Sobic.003G013800 S. bicolor v3.1.1
Defline:  similar to Putative uncharacterized protein Genomic Order:  144
Name:  ? Sobic.003G013800 Secondary Identifier:  ? PAC:37918392
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G013800 0.5kb upstream 0.5kb upstream 4711 true Chr03: 1224044-1228754 Sorghum bicolor
Sobic.003G013800 0.5kb upstream 0.5kb upstream 500 false Chr03: 1224044-1224543 Sorghum bicolor
Sobic.003G013800 0.5kb downstream 0.5kb downstream 4711 true Chr03: 1224544-1229254 Sorghum bicolor
Sobic.003G013800 0.5kb downstream 0.5kb downstream 500 false Chr03: 1228755-1229254 Sorghum bicolor
Sobic.003G013800 1.0kb upstream 1.0kb upstream 5211 true Chr03: 1223544-1228754 Sorghum bicolor
Sobic.003G013800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1223544-1224543 Sorghum bicolor
Sobic.003G013800 1.0kb downstream 1.0kb downstream 5211 true Chr03: 1224544-1229754 Sorghum bicolor
Sobic.003G013800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1228755-1229754 Sorghum bicolor
Sobic.003G013800 2.0kb upstream 2.0kb upstream 6211 true Chr03: 1222544-1228754 Sorghum bicolor
Sobic.003G013800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1222544-1224543 Sorghum bicolor
Sobic.003G013800 2.0kb downstream 2.0kb downstream 6211 true Chr03: 1224544-1230754 Sorghum bicolor
Sobic.003G013800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1228755-1230754 Sorghum bicolor
Sobic.003G013800 5.0kb upstream 5.0kb upstream 9211 true Chr03: 1219544-1228754 Sorghum bicolor
Sobic.003G013800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1219544-1224543 Sorghum bicolor
Sobic.003G013800 5.0kb downstream 5.0kb downstream 9211 true Chr03: 1224544-1233754 Sorghum bicolor
Sobic.003G013800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1228755-1233754 Sorghum bicolor
Sobic.003G013800 10.0kb upstream 10.0kb upstream 14211 true Chr03: 1214544-1228754 Sorghum bicolor
Sobic.003G013800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1214544-1224543 Sorghum bicolor
Sobic.003G013800 10.0kb downstream 10.0kb downstream 14211 true Chr03: 1224544-1238754 Sorghum bicolor
Sobic.003G013800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1228755-1238754 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189129 5267 Panicoideae View MSA
124581704 5269 Grass View MSA
122042830 5273 Angiosperm View MSA
121310031 5274 Embryophyte View MSA
123347634 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.611        
cufflinks 0.003     Low Low
cufflinks 0.025     Low Low
cufflinks 0.02     Low Low
cufflinks 1.74        
cufflinks 0.188        
cufflinks 1.369        
cufflinks 0.049     Low Low
cufflinks 0.15        
cufflinks 0.314        
cufflinks 0.996        
cufflinks 1.097        
cufflinks 0.163        
cufflinks 1.442        
cufflinks 0.809        
cufflinks 0.023     Low Low
cufflinks 1.313        
cufflinks 1.422        
cufflinks 0.089     Low  
cufflinks 0.892        
cufflinks 4.069       High
cufflinks 1.596        
cufflinks 1.354        
cufflinks 1.394        
cufflinks 0.05     Low  
cufflinks 0.01     Low Low
cufflinks 0.332        
cufflinks 0.135        
cufflinks 0.202        
cufflinks 1.338        

0 Strain