Gene : Sobic.003G017200 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR11362//PTHR11362:SF21 - PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  182
Name:  ? Sobic.003G017200 Secondary Identifier:  ? PAC:37913404
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G017200 0.5kb upstream 0.5kb upstream 6351 true Chr03: 1518090-1524440 Sorghum bicolor
Sobic.003G017200 0.5kb upstream 0.5kb upstream 500 false Chr03: 1523941-1524440 Sorghum bicolor
Sobic.003G017200 0.5kb downstream 0.5kb downstream 6351 true Chr03: 1517590-1523940 Sorghum bicolor
Sobic.003G017200 0.5kb downstream 0.5kb downstream 500 false Chr03: 1517590-1518089 Sorghum bicolor
Sobic.003G017200 1.0kb upstream 1.0kb upstream 6851 true Chr03: 1518090-1524940 Sorghum bicolor
Sobic.003G017200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1523941-1524940 Sorghum bicolor
Sobic.003G017200 1.0kb downstream 1.0kb downstream 6851 true Chr03: 1517090-1523940 Sorghum bicolor
Sobic.003G017200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1517090-1518089 Sorghum bicolor
Sobic.003G017200 2.0kb upstream 2.0kb upstream 7851 true Chr03: 1518090-1525940 Sorghum bicolor
Sobic.003G017200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1523941-1525940 Sorghum bicolor
Sobic.003G017200 2.0kb downstream 2.0kb downstream 7851 true Chr03: 1516090-1523940 Sorghum bicolor
Sobic.003G017200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1516090-1518089 Sorghum bicolor
Sobic.003G017200 5.0kb upstream 5.0kb upstream 10851 true Chr03: 1518090-1528940 Sorghum bicolor
Sobic.003G017200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1523941-1528940 Sorghum bicolor
Sobic.003G017200 5.0kb downstream 5.0kb downstream 10851 true Chr03: 1513090-1523940 Sorghum bicolor
Sobic.003G017200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1513090-1518089 Sorghum bicolor
Sobic.003G017200 10.0kb upstream 10.0kb upstream 15851 true Chr03: 1518090-1533940 Sorghum bicolor
Sobic.003G017200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1523941-1533940 Sorghum bicolor
Sobic.003G017200 10.0kb downstream 10.0kb downstream 15851 true Chr03: 1508090-1523940 Sorghum bicolor
Sobic.003G017200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1508090-1518089 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189286 5267 Panicoideae View MSA
124583697 5269 Grass View MSA
122044368 5273 Angiosperm View MSA
123429087 5275 Viridiplantae View MSA
121310284 5274 Embryophyte View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.422        
cufflinks 0.005     Low Low
cufflinks 0.38        
cufflinks 6.302       High
cufflinks 0.777        
cufflinks 34.34     High High
cufflinks 0.012     Low  
cufflinks 0.003     Low Low
cufflinks 11.84       High
cufflinks 19.965     High High
cufflinks 0.014     Low  
cufflinks 0.078     Low  
cufflinks 39.838     High High
cufflinks 0.035     Low  
cufflinks 17.051     High High
cufflinks 0.034     Low  
cufflinks 0.01     Low  
cufflinks 0.01     Low  
cufflinks 0.013     Low  
cufflinks 0.037     Low  
cufflinks 2.802        
cufflinks 0.048     Low  
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.162        
cufflinks 0.011     Low  
cufflinks 0.032     Low  
cufflinks 0.155        
cufflinks 0.003     Low Low
cufflinks 18.765     High High

0 Strain