Gene : Sobic.003G022800 S. bicolor v3.1.1
Defline:  (1 of 1) PTHR12059:SF5 - 39S RIBOSOMAL PROTEIN L23, MITOCHONDRIAL Genomic Order:  236
Name:  ? Sobic.003G022800 Secondary Identifier:  ? PAC:37917614
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Sobic.003G022800 0.5kb upstream 0.5kb upstream 4215 true Chr03: 1966096-1970310 Sorghum bicolor
Sobic.003G022800 0.5kb upstream 0.5kb upstream 500 false Chr03: 1969811-1970310 Sorghum bicolor
Sobic.003G022800 0.5kb downstream 0.5kb downstream 4215 true Chr03: 1965596-1969810 Sorghum bicolor
Sobic.003G022800 0.5kb downstream 0.5kb downstream 500 false Chr03: 1965596-1966095 Sorghum bicolor
Sobic.003G022800 1.0kb upstream 1.0kb upstream 4715 true Chr03: 1966096-1970810 Sorghum bicolor
Sobic.003G022800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 1969811-1970810 Sorghum bicolor
Sobic.003G022800 1.0kb downstream 1.0kb downstream 4715 true Chr03: 1965096-1969810 Sorghum bicolor
Sobic.003G022800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 1965096-1966095 Sorghum bicolor
Sobic.003G022800 2.0kb upstream 2.0kb upstream 5715 true Chr03: 1966096-1971810 Sorghum bicolor
Sobic.003G022800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 1969811-1971810 Sorghum bicolor
Sobic.003G022800 2.0kb downstream 2.0kb downstream 5715 true Chr03: 1964096-1969810 Sorghum bicolor
Sobic.003G022800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 1964096-1966095 Sorghum bicolor
Sobic.003G022800 5.0kb upstream 5.0kb upstream 8715 true Chr03: 1966096-1974810 Sorghum bicolor
Sobic.003G022800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 1969811-1974810 Sorghum bicolor
Sobic.003G022800 5.0kb downstream 5.0kb downstream 8715 true Chr03: 1961096-1969810 Sorghum bicolor
Sobic.003G022800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 1961096-1966095 Sorghum bicolor
Sobic.003G022800 10.0kb upstream 10.0kb upstream 13715 true Chr03: 1966096-1979810 Sorghum bicolor
Sobic.003G022800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 1969811-1979810 Sorghum bicolor
Sobic.003G022800 10.0kb downstream 10.0kb downstream 13715 true Chr03: 1956096-1969810 Sorghum bicolor
Sobic.003G022800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 1956096-1966095 Sorghum bicolor

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122178153 5267 Panicoideae View MSA
124569734 5269 Grass View MSA
122044444 5273 Angiosperm View MSA
121349805 5274 Embryophyte View MSA
123426659 5275 Viridiplantae View MSA

47 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.325       High
cufflinks 0.556       Low
cufflinks 0.918       Low
cufflinks 2.064        
cufflinks 2.425        
cufflinks 2.35        
cufflinks 1.667        
cufflinks 0.847       Low
cufflinks 1.854        
cufflinks 1.715        
cufflinks 2.785        
cufflinks 1.737        
cufflinks 1.299        
cufflinks 2.375        
cufflinks 1.426        
cufflinks 1.107        
cufflinks 1.823        
cufflinks 1.864        
cufflinks 0.891       Low
cufflinks 1.613        
cufflinks 2.799        
cufflinks 4.327       High
cufflinks 2.798        
cufflinks 3.051        
cufflinks 0.646       Low
cufflinks 0.522       Low
cufflinks 1.047        
cufflinks 13.823     High High
cufflinks 1.53        
cufflinks 2.159        

0 Strain